AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fro12g02465 ATGCGGTCATCCATGACAATTACAAGCCCTAACTTCCCATCATTGCCCCAATTTCACCAATCCAACACCCATCTCCAACCATACAAACAACCACCAATTATTACACTTCAAAAACCAACAAAACCCCATGATATTTCTGCAAAATCCCTGAAAAATTCAGGGTTTTTATCGGCAATTGGGAACGCAATTGAAGAACAACAGTATCGGAAAGCCAGGGCTGAAGTTGTTCGAAAAGGAACGGGGTTAGAGGGTTACAATATTGAGGGTCTTTCGATTGGTGGTCATGAAACATGTGTTATTATTCCAGAATTCAAGTGTGCATTCGATATCGGAAGGTGTCCTCCCAGAGCTGTTGCGATGAATTTCTTGTTTATTACTCATGCTCACCTTGATCACATTGGTGGGCTACCGATGTATGTTGCAACTCGCGGTTTATACAACATGAGTCCTCCAACAGTATTTGTACCTCCTTCCATTAAAGAAGATGTTGAAAATTTGATTGAGCTTCACAGGAAGATGGGTGATGTAGAATTAAATCTTGATTTGGTTGCATTGGATGTAGGGGAAACATATGAGCTAAGAAACGATCTTGTTGTACGCCCATTTAAAACTCATCATGTAATACCTAGTCAGGGTTATGTGATTTACTCGGTTCGCAAGAAACTGAAAAAGCAATACATACACTTAAAAGGAAGGGAGATTGAGAAAAAGAAGAAATCTGGTGTTGAGATAACAGATATCATACTATCCCCGGAGGTCGCATTCACCGGAGATACAAGTTCTGATTTTCTGCTTGATCCACGAAGTTCTGATGCCTTGAGAGCCAAAATTCTCATAACTGAGGCTACTTTCTTGGATGACAAATGCGACATTGAGCATGCACGAGAACATGGTCACATGCATATTGACGAGATTATCGAGCATTCTAAGTGGATTAGGAACAAGGCAATTCTTTTGACTCATTTCTCATCACGGTACCACATCGAGGAGATTCGTCAAGCTGTGACTAAGTTGCAGGCAAAGGTTCCAGCCAAAGTGGTACCACTTACGGAAGGTTTTAGATCATTGTACTCACCGTGA 1080 41.2 MRSSMTITSPNFPSLPQFHQSNTHLQPYKQPPIITLQKPTKPHDISAKSLKNSGFLSAIGNAIEEQQYRKARAEVVRKGTGLEGYNIEGLSIGGHETCVIIPEFKCAFDIGRCPPRAVAMNFLFITHAHLDHIGGLPMYVATRGLYNMSPPTVFVPPSIKEDVENLIELHRKMGDVELNLDLVALDVGETYELRNDLVVRPFKTHHVIPSQGYVIYSVRKKLKKQYIHLKGREIEKKKKSGVEITDIILSPEVAFTGDTSSDFLLDPRSSDALRAKILITEATFLDDKCDIEHAREHGHMHIDEIIEHSKWIRNKAILLTHFSSRYHIEEIRQAVTKLQAKVPAKVVPLTEGFRSLYSP 359
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fro12g02465 359 MobiDBLite consensus disorder prediction 1 23 - -
Fro12g02465 359 PANTHER TRNASE Z TRZ1 45 353 - -
Fro12g02465 359 Gene3D - 85 354 IPR036866 -
Fro12g02465 359 Pfam Beta-lactamase superfamily domain 119 322 IPR001279 -
Fro12g02465 359 SUPERFAMILY Metallo-hydrolase-oxidoreductase 120 335 IPR036866 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fro12g02465 K00784 ribonuclease Z [EC:3.1.26.11]
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fro Fro-Chr11:3805170 Fro12g02465 Fro-Chr12:32393519 dispersed