AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fro12g02506 ATGGACGAATCGGAGAAGGCGTCGGAAGCCAAGAGAACCACCGTCGGACCACCCTCCGTCGTCGCTTACCTCGACCCCAACTATTGGAATGAGAGGTTCAGTTCTGAGGATCATTACGAATGGCTTAAAGATTACTCACATTTTCGTCATTTGATCCAACAGCATATCAAATCAGATTCTTCAGTATTGGAGCTTGGGTGTGGAAGCTCACAACTGTGTGATGAGCTATATAAGGAAGGAATTACTAAACTAACCTGCATTGATCTATCTCCAGTTGCAGTTGAGAAAATGCAAAAAAGGTTGTTTTCTAAAGGGTACAAAGATATCAAAGTGTTGGAAGGCGATATGCTGAATCTTTCTTTTGCTGATGAATCATTTGATGTTGTTATAGAGAAAGGAACCATGGATGTTTTGTTCGTGGACAGTGGTGACCCGTGGAACCCACGGCCTGAGGCTGTAAAGAAAGGAATGGCTATGCTTCAAGGTGTTCATAGGGTTTTGAAACCCCATGGGATTTTCATCTCAATCGCATTTGGTCAGCCACACTTCAGACGTCCACTATTTAATGCTCCTGAGTTTACATGGTCTGTTGATTACACTACATTTGGAGATGGATTTCATTATTTCTTTTATATCTTGAGGAAGGGATGTAAATCAATAGATGCTGATGCAGATGTCAAGAAAGTTGAGACACCATCTCTATGCCTTTATCAAGATGAATTGGACAATGAAGATTACTTATTTCGTACCAACATTGATGAGCTTGATGATCAAAGATGA 780 41.03 MDESEKASEAKRTTVGPPSVVAYLDPNYWNERFSSEDHYEWLKDYSHFRHLIQQHIKSDSSVLELGCGSSQLCDELYKEGITKLTCIDLSPVAVEKMQKRLFSKGYKDIKVLEGDMLNLSFADESFDVVIEKGTMDVLFVDSGDPWNPRPEAVKKGMAMLQGVHRVLKPHGIFISIAFGQPHFRRPLFNAPEFTWSVDYTTFGDGFHYFFYILRKGCKSIDADADVKKVETPSLCLYQDELDNEDYLFRTNIDELDDQR 259
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fro12g02506 259 PANTHER SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN 15 216 IPR051419 -
Fro12g02506 259 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 23 213 IPR029063 -
Fro12g02506 259 Pfam Methyltransferase domain 56 177 IPR025714 -
Fro12g02506 259 CDD AdoMet-MTases 62 178 - -
Fro12g02506 259 Gene3D Vaccinia Virus protein VP39 21 230 IPR029063 -
Fro12g02506 259 FunFam EEF1A lysine methyltransferase 4 21 232 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fro12g02506 K22857 EEF1A lysine methyltransferase 4 [EC:2.1.1.-]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fro Fro-Chr12:32858379 Fro13g01419 Fro-Chr13:23578831 dispersed
Fro Fro-Chr12:32858379 Fro14g00817 Fro-Chr14:9965333 transposed