AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fro12g02515 ATGGCTTCTTCTTCCTGTTGCAGCTTCATCTTCTTTACTCTATTGCTTATACAATTTTGCAGTGCTCGTGAAATTGTGGACAAGAACCTAAAAGACGATCACCACGAAGATAATCATATAAATTTATACGGGAATAGTGGTGTTTATGATTTGGATCCGGCTCTAAATGTGTTCTTCCATGTAAACGATTTATATTCGGGCAAAAAAATGCCAATATATTTCGCCGTTAACGATCCTTCAACAACTCCTCGGTTGTTAACACAAGAACAATCCAACTCCATACCATTTTCCTCCAAAAAGCTCGCGTATCTTCTAGAACTAACATCGTTACCCGAGGGTTCACCTCAAGCTTTAGCCATGGAGCAAACACTCAAACAATGTGAGCTTGAGGCAACCCCGGGTGAGACGAGGTTCTGTGCTAGCTCGTTAGAGTCCATGCTGGACTCTACACGCGAGATATTGGGTACGGTCAAACTAAAGGCGTTGACCACCAATATCCGCAATTTGTCAAATACCCTTTTGCAAGGGTACACCTTTTTGAATGAGCCAGTGGAGATTAACGTTTCTGATATGGTGGCATGTCACACCATGGCTTACCCTTATGCTGTTTATTATTGTCATGGTCAAAAGGGGTATAATAGGGTGTTTGAGATTTCTTTAGGGGGTGAAAATGGAAATATAGTGGATGCTATTGCTGTCTGCCACATGGACACTTCCATGTGGGAGAGTGACCACGTGGCGTTTCGTGTGCTTGGAGGCCAGCCTGGCAGCTCGCCAGTGTGTCATTTTCTCCCAGCCGATAACATTGTGTGGATACCGTCGCCATAG 828 44.08 MASSSCCSFIFFTLLLIQFCSAREIVDKNLKDDHHEDNHINLYGNSGVYDLDPALNVFFHVNDLYSGKKMPIYFAVNDPSTTPRLLTQEQSNSIPFSSKKLAYLLELTSLPEGSPQALAMEQTLKQCELEATPGETRFCASSLESMLDSTREILGTVKLKALTTNIRNLSNTLLQGYTFLNEPVEINVSDMVACHTMAYPYAVYYCHGQKGYNRVFEISLGGENGNIVDAIAVCHMDTSMWESDHVAFRVLGGQPGSSPVCHFLPADNIVWIPSP 275
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fro12g02515 275 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 41 274 IPR044816 -
Fro12g02515 275 SMART BURP-2 56 274 IPR004873 -
Fro12g02515 275 ProSiteProfiles BURP domain profile. 58 274 IPR004873 -
Fro12g02515 275 Pfam BURP domain 57 272 IPR004873 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fro12g02515 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
92765 Fro12g02515 Fro9g01126
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fro Fro-Chr12:32909087 Fro9g01128 Fro-Chr9:24171987 dispersed
Fro Fro-Chr12:32909087 Fro12g02517 Fro-Chr12:32928787 proximal
Fro Fro-Chr12:32909087 Fro2g01551 Fro-Chr2:19982523 wgd
Fro Fro-Chr12:32909087 Fro9g01126 Fro-Chr9:24147972 wgd