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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fro12g02521 ATGGGTCGCAAATGGGTCGTTGAGTATCAAATTGGCGTGAAGGATTTGTCGATTGATGACTGTGATCCAAAGCAGACAGTTTATATTTTTGGATGCAAAGATTCAGTTCTTCAGATCAAAGGGAAAGTTAACAACATAACTGTTGACAAATGCACCAAAATGGGTGTTGTATTTACGGACGTTGTTGCTGCTTTTGAGATTGTTAATTGCAGCAGTGTTGAGGTGCAATGCCAGGGTGCAGCCCCTACCATTTCAATAGACAACACAGCAGGTTGCCAACTGTACTTGAGCAAAGAATCTCTAGAATCTTCTATCACAACTTCCAAGGCAAGTGAAGTGAATGTGATGGTACCTGCTGAAGATCCTGATGCGGATCTGGCGGAACATGCTATGCCACACCAATACATCCACACTTACCAAGATGGCCACTTCGTTACAACCCCAGTCTCCCACTCCGGCGGGTAA 465 44.52 MGRKWVVEYQIGVKDLSIDDCDPKQTVYIFGCKDSVLQIKGKVNNITVDKCTKMGVVFTDVVAAFEIVNCSSVEVQCQGAAPTISIDNTAGCQLYLSKESLESSITTSKASEVNVMVPAEDPDADLAEHAMPHQYIHTYQDGHFVTTPVSHSGG 154
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fro12g02521 154 PANTHER ADENYLYL CYCLASE-ASSOCIATED PROTEIN 1 152 IPR001837 GO:0003779(PANTHER)|GO:0003779(InterPro)|GO:0005737(PANTHER)|GO:0007010(InterPro)|GO:0007015(PANTHER)|GO:0008179(PANTHER)|GO:0019933(PANTHER)
Fro12g02521 154 SMART carp 32 69 IPR006599 -
Fro12g02521 154 SMART carp 70 107 IPR006599 -
Fro12g02521 154 Pfam Adenylate cyclase associated (CAP) C terminal 2 151 IPR013912 GO:0003779(InterPro)|GO:0007010(InterPro)
Fro12g02521 154 ProSiteProfiles C-CAP-cofactor C-like domain profile. 1 131 IPR017901 -
Fro12g02521 154 FunFam Adenylyl cyclase-associated protein 1 153 - -
Fro12g02521 154 SUPERFAMILY C-terminal domain of adenylylcyclase associated protein 2 153 IPR036223 -
Fro12g02521 154 Gene3D - 1 153 IPR016098 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fro12g02521 K17261 adenylyl cyclase-associated protein
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Event-related genes

Select Gene_1 Gene_2 Event_name
92768 Fro12g02521 Fro4g00679
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fro Fro-Chr12:32958618 Fro2g01539 Fro-Chr2:19765450 wgd
Fro Fro-Chr12:32958618 Fro4g00679 Fro-Chr4:6738349 wgd