Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Fro12g02558	ATGGAGACTAACAACAAGCTCAAAATCGCATTTACAGTTACATGTCTTGTTGTAGTTTCAATTTTAATGGCGAACAGATTTCGGAAGCAGCGAAAGCGAAAACAGAACATAAGCTCTTGTTACCTGAAATCAGAAGCAAAACCGCAGCACAATTTCAAGCGTGTTTTAGCGAACAATTCGTATGCTCCATTCAAGCACCTCAAGCTCGACGATAGTTCTTCAGATTTGCATCCCTATGAATCAGAGATCAAGGCTCTATTGGAGAAATCACAGCTAGAACTTGAGTTTTCTAACGGAATTATGGATACGAGCATGAGTGATAAGTATCTTTGGGTTGATGATGAATCAAAATTAAAGGGACTTGTTGAGGTGTTGAATAAAGAAAGGGTGTTTGCTGTTGATACTGAGCAGCATAGCTTACGGTCATTCTTAGGGTTTACAGCTCTTATTCAGATTTCTACTAGAGATGAAGATTATTTGGTGGACACCATTGCTCTTCATGATATTATGGGAATGCTTGGCCCTGTATTTGCCAATCCCAACATATGCAAGGTGTTCCATGGAGCTGATAATGATGTTATATGGCTACAAAGAGATTTTCATATTTATGTTGTAAACTTATTTGATACTGCGAAGGCTTGTGATGTGTTATCAAAACCACAGAGATCATTAGCCTACTTACTTGAAACATACTGTGGTGTCACCACTAACAAGCTTTACCAGCGTGAAGACTGGCGACAACGTCCACTACCAATAGATATGGTTGAATATGCTCGTATGGATGCACACTATTTGCTATATATTGCAGATCGTCTTGTTTCTGAGCTCAAAAACCAGAAAAATGATAATAGTGCATCAGAAAATTCAGCCGGTCTCGATGACAAGTTGCATTTTGTTTCTGAGGCCATCCGGCGTTCGAATGCCTTGTGTCTGCAACTCTTCACCAAAGATTTAGAAGCTTCCCCGGGGCAGGCTGCTGCTTCTTCTATTATTTCCCGCCATTTAAATGATCATGGAGATTCTATAAACAACAGTCAGTTTCAGGATCTCGTTAGGCGTCTTTGCTCTTGGAGGGATTTGATGGCCCGCGTGCATGATGAGAGCCTAAAATACGTGCTATCTGATAATGCTATTGTCTCTCTGGCTGAAAAGGTTCCATTAACTCCAACAGATGTTTGCACTACAATATCACAAGCTGATATAGACATAGACTTTCTTAATTCCAATTCTACTGCTGGGCTTCCATCCTCTGTTGTTTTAAGTCATTTGGATGACTTTCCTTACCTCCTCCAAAATGAGATAAACAATCTTGATGATATATTTCAACTAATTCTCAAAAAGCACCTTGGTCCAAATGGTTCTTGCCCTTTTTCACTTTATAACTATAGTTTACTTTCAAAAGCCGACATCAAATCTTCAAAGAGATTAGTTTCAAAGGAAAATGGATATAAGTTTCCAAAACAAGTTGCTCGCAAGGCTTCTCGAGAGCTTTTTGTTCAAAAGTTTTCTTGCAAATCTCCGGTGTATCATAACTGCAGGATATATGCTAATGATGGCAGATTGTTATGTTACTGTGATCGAAGAAAGCTGGAATGGTATTTGCAGCGGGACCTAGCAAAACTTGTTGATGAAGACCCACCGGCCATAATGCTTCTCTTTGAACCCAAAGGCCGCCCAGAAGATGAAGGAAACGATTTTTACATTCAAAGTAAAAAGAATATATGTGTAGGGTGCGGTGAAGGAAATCACTATTTACGGTATCGTATAATCCCATCATGCTATAGAATACACTTTCCTGAACATTTAAAAAGCCACCGGTCTCATGATATTGTTCTAGTTTGTGTCGATTGCCATGAAAAAGCACATAAATCTGCTGAGAAGTACAAAAAGAAAGTAGCTTTAGAATTTGGGATACCATTGTTTGTACATAAAGTGGTTAGTTCTAATGAGGAACAAGATGTTTCTAGTTCTTCAACATCTGTCATGAAACTTGGTGATGGCGGCGTGTCTCCTTTAGAGTTGAGAACGGCTGCAATGGCTCTTTTAAGACATGGCCCACGGATGCCACCTCAGCGCCGAGAGGAATTGAAGCAGGTTGTCAAGAAATATTATGGAGGAAGAGATGTATCAGATGAAGATTTGGAGAAGGCTTTACTAGTAGGAATGAGTCCTCACGAAAAAAGACGATTACAGAAAAAACGAGGCATATCTCTTAATCATATTTCCGCAAAGAACCTTGTTACAGACAAGGACATCAAGGAAAATGATGCGGATTCAGCAGCTAACCAAAATGAAGTTTGTGAGCCCGAAAATGGTTCTAATCTGGATGTTATGGATCCTTCTGAACCAAACGGGTCATGTCATCCGAGTTCAGATGGGGCGGTCTTTGCTACATGTAGTTCAAAGCTATCACTATTAGGGCATGGCCCGCATGGGAAACAAGTTGTTGATTATTTGCTGAAGAATCATGGGGAAAATGGGATTCAGGAGTTTTGTCAAAGATGGAGACAAGTATTTGTCGAAAGCATTAATCCTCGATTTTTACCTGCGGGTTGGGACGTTACTCACAGGTACGTTTCTTTACACATCTTTGACTTTGATCATTGA	2607	39.89	METNNKLKIAFTVTCLVVVSILMANRFRKQRKRKQNISSCYLKSEAKPQHNFKRVLANNSYAPFKHLKLDDSSSDLHPYESEIKALLEKSQLELEFSNGIMDTSMSDKYLWVDDESKLKGLVEVLNKERVFAVDTEQHSLRSFLGFTALIQISTRDEDYLVDTIALHDIMGMLGPVFANPNICKVFHGADNDVIWLQRDFHIYVVNLFDTAKACDVLSKPQRSLAYLLETYCGVTTNKLYQREDWRQRPLPIDMVEYARMDAHYLLYIADRLVSELKNQKNDNSASENSAGLDDKLHFVSEAIRRSNALCLQLFTKDLEASPGQAAASSIISRHLNDHGDSINNSQFQDLVRRLCSWRDLMARVHDESLKYVLSDNAIVSLAEKVPLTPTDVCTTISQADIDIDFLNSNSTAGLPSSVVLSHLDDFPYLLQNEINNLDDIFQLILKKHLGPNGSCPFSLYNYSLLSKADIKSSKRLVSKENGYKFPKQVARKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLQRDLAKLVDEDPPAIMLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLVCVDCHEKAHKSAEKYKKKVALEFGIPLFVHKVVSSNEEQDVSSSSTSVMKLGDGGVSPLELRTAAMALLRHGPRMPPQRREELKQVVKKYYGGRDVSDEDLEKALLVGMSPHEKRRLQKKRGISLNHISAKNLVTDKDIKENDADSAANQNEVCEPENGSNLDVMDPSEPNGSCHPSSDGAVFATCSSKLSLLGHGPHGKQVVDYLLKNHGENGIQEFCQRWRQVFVESINPRFLPAGWDVTHRYVSLHIFDFDH	868

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Fro12g02558	868	ProSiteProfiles	HRDC domain profile.	344	433	IPR002121	GO:0003676(InterPro)
	Fro12g02558	868	FunFam	Polynucleotidyl transferase ribonuclease H fold protein with HRDC domain	46	320	-	-
	Fro12g02558	868	SUPERFAMILY	Ribonuclease H-like	47	289	IPR012337	-
	Fro12g02558	868	MobiDBLite	consensus disorder prediction	757	790	-	-
	Fro12g02558	868	Coils	Coil	269	289	-	-
	Fro12g02558	868	SMART	35exoneu6	109	277	IPR002562	GO:0003676(InterPro)\|GO:0006139(InterPro)\|GO:0008408(InterPro)
	Fro12g02558	868	Gene3D	HRDC domain	335	441	IPR044876	-
	Fro12g02558	868	Gene3D	-	46	319	IPR036397	GO:0003676(InterPro)
	Fro12g02558	868	Pfam	3'-5' exonuclease	110	276	IPR002562	GO:0003676(InterPro)\|GO:0006139(InterPro)\|GO:0008408(InterPro)
	Fro12g02558	868	Pfam	HRDC domain	348	391	IPR002121	GO:0003676(InterPro)
	Fro12g02558	868	PANTHER	POLYMYOSITIS-SCLERODERMA AUTOANTIGEN-RELATED	29	853	IPR045092	GO:0000175(InterPro)\|GO:0000175(PANTHER)\|GO:0000176(PANTHER)\|GO:0000467(InterPro)\|GO:0000467(PANTHER)\|GO:0003727(PANTHER)\|GO:0005730(PANTHER)\|GO:0071035(PANTHER)\|GO:0071036(PANTHER)\|GO:0071037(PANTHER)\|GO:0071038(PANTHER)\|GO:0071039(PANTHER)\|GO:0071040(PANTHER)\|GO:0071044(PANTHER)\|GO:0071051(PANTHER)
	Fro12g02558	868	CDD	Rrp6p-like-exo	105	283	IPR049559	-
	Fro12g02558	868	SUPERFAMILY	HRDC-like	343	396	IPR010997	GO:0000166(InterPro)\|GO:0044237(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Fro12g02558	K12951	cobalt/nickel-transporting P-type ATPase D [EC:7.2.2.-]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Fro	Fro-Chr12:33411936	Fro5g00885	Fro-Chr5:15533343	dispersed