AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fro12g02583 ATGTTGAGCAACACCGGTGGAGGAACCTTTTACTGGTTCCGAAACGAAGAAGAGACGAATTCGCCATCGAAATTTGAAGGAATCGTTGTGGTTTTCAGCTGGGGTTCGATTGTAGAGGCTCAATTGAAGGGTTATGTTGATCTTTATGCGTCTTGTGGTTGGAATTCGCTTGTTGTTTGTTCCGATTTTCTCAATCCATTTTTGCCAGAGAGAGCCACATCACTTGCATTTTCTGTTCTCAATGAGCTTTTAGAGGAATTGAGGGCTAGACCATGTCCTTTGGTCTTTGCAGCCTTTTCTGGTGGTTCACAAGCTTGTATGTATAAGGTTCTTCAGATCATTGAAAGGACATGTGAGGCACATCTTAATCTGGATGATAGTCGTTTAATCATGACCTGCATCTCTGGTCAAATGTACGACTCTGGTCCGGTCAATGTAACCAGTGATTTGGGTGCCCGGTTTGCCCTACAATCTTCCATTCTCAATGTACCTGGTTCATCAAAGCTGGTATCAATGGTTGCAAAAGGTGTCACATCTGGTCTCGATGCCATGTTCCTTACTAGATTTGGTTCCAACCGCTCTGAATATTGGCAAACGTTGTATTCATCTGTTGGTTTGGGTGCCCCATTTCTCATATTGTGTTCGGAAAATGATGATCTTGCCCCTTATCCAGTTATTTGCTCATTTGCTCAACAAGTACAAGGTTTAGGAGGACATGTTCGACTTATTGGATGGAAGGACTCTCCTCATGTAGGTCACTACAAGCACAACCCCATCCAATACAGAGCAGCCGTAACCGAATTTCTTGACCACTCGATTTCAATATTTAACCAAAAACTTCAAACACTCGGTGAAAGAAACGGCATGGAGGGCATGCACGACAAAATATGTGAATTGATTTGTGATCTACAAAATGCAGCAGTTGATTCAAACCAAAGCCTTAGAAGAGTAGCAGTCGGGCCAAACGACCACTTTTTCTTACCAAGTTCAGCCGAGTATCAAACCACTAAAGAATCGGGCTCATTACAAGATGAACAAAAAACAACGGTCCAGTTAGCAAGCCCACCGGGCCTGAACCCACACAGTGTTCTCGGTCAAGTGCTGTTTGATGTGTGTGTCCCTAAAAACATTGAAGGTTGGGATATTAAGTTCGAAAACAGAAAGACACTTGCAGGCGCAGGTAAACGACCATCATCTTTAAAACGCATGAGACGATCAAGATTATGA 1227 43.19 MLSNTGGGTFYWFRNEEETNSPSKFEGIVVVFSWGSIVEAQLKGYVDLYASCGWNSLVVCSDFLNPFLPERATSLAFSVLNELLEELRARPCPLVFAAFSGGSQACMYKVLQIIERTCEAHLNLDDSRLIMTCISGQMYDSGPVNVTSDLGARFALQSSILNVPGSSKLVSMVAKGVTSGLDAMFLTRFGSNRSEYWQTLYSSVGLGAPFLILCSENDDLAPYPVICSFAQQVQGLGGHVRLIGWKDSPHVGHYKHNPIQYRAAVTEFLDHSISIFNQKLQTLGERNGMEGMHDKICELICDLQNAAVDSNQSLRRVAVGPNDHFFLPSSAEYQTTKESGSLQDEQKTTVQLASPPGLNPHSVLGQVLFDVCVPKNIEGWDIKFENRKTLAGAGKRPSSLKRMRRSRL 408
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fro12g02583 408 PANTHER UNCHARACTERIZED 17 277 IPR008547 -
Fro12g02583 408 Pfam Eukaryotic protein of unknown function (DUF829) 134 380 IPR008547 -
Fro12g02583 408 SUPERFAMILY alpha-beta-Hydrolases 29 271 IPR029058 -
Fro12g02583 408 Gene3D alpha-beta hydrolase 143 283 IPR029058 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fro12g02583 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fro Fro-Chr12:33679694 Fro17g01296 Fro-Chr17:21228751 wgd
Fro Fro-Chr12:33679694 Fro2g01568 Fro-Chr2:20166332 wgd