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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fro12g02589 ATGGCGGAACCAAAACAATCACATCAGTTTCTCTCCAAACAACGCTCGTGGTCACCGGACATCCACCGCGACATCGAGTGGCAGAAGCTGAAGAACAACCAGCAACGCCGCTACCGCCACCGCCGGAGCAAGAGCATCGACGGTGTTAGAGAAGTTGAAGTCACTGATGATGATGTGAAGGAGCTGAAAGCGTGCTTCGATCTAGGTTTCGGTTTTGGTTTTGATTTCTCTAGTGATTTGGATCCGAAGCTTTCGCAGGCTTTTCCGGCGCTCGAACTTTACGCTGCGGTTAATCGGCAGTATAATAGTAGGATTCTGTCGAGATCTTCGTCGTTGAGTTCGGATTCATCGTCGAGTTCGTCGTGTTCAACCATTGCTATCATCGATCCAAGTGATGATCCGAAGAAGGTGAAGACCAAACTGAAGCAATGGGCGCAATTGGTTTCTTGTTCGGTTCTGGAAGCTTCTTCTCAGCTCGCCAATAACAAAAATCCTGCGGAATAG 504 48.81 MAEPKQSHQFLSKQRSWSPDIHRDIEWQKLKNNQQRRYRHRRSKSIDGVREVEVTDDDVKELKACFDLGFGFGFDFSSDLDPKLSQAFPALELYAAVNRQYNSRILSRSSSLSSDSSSSSSCSTIAIIDPSDDPKKVKTKLKQWAQLVSCSVLEASSQLANNKNPAE 167
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fro12g02589 167 PANTHER OSJNBA0071G03.3 PROTEIN 8 153 - -
Fro12g02589 167 MobiDBLite consensus disorder prediction 109 127 - -
Fro12g02589 167 MobiDBLite consensus disorder prediction 109 135 - -
Fro12g02589 167 Pfam Protein of unknown function (DUF1685) 54 115 IPR012881 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fro12g02589 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
92793 Fro12g02589 Fro9g01010
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fro Fro-Chr12:33735964 Fro15g01520 Fro-Chr15:30194858 dispersed
Fro Fro-Chr11:8399909 Fro12g02589 Fro-Chr12:33735964 wgd
Fro Fro-Chr12:33735964 Fro2g01575 Fro-Chr2:20259129 wgd
Fro Fro-Chr12:33735964 Fro8g01223 Fro-Chr8:11235299 wgd
Fro Fro-Chr12:33735964 Fro9g01010 Fro-Chr9:22939682 wgd