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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fro12g02590 ATGAGTTCATTTATCAACTTCAAGAACTATGGTGATACATCACAACCAGAACTCAATTGCAGTAAACAAATGGTGGCGAATTCACCGTTGACCCGCCAATCTTCCATCTACTCGTTGACTTTTGATGAATTGCAAAGCACTTTAGGTGGTAGTGGGAAAGATTTTGGATCAATGAACATGGATGAACTTTTGAAGAACATTTGGAGTGTTGAAGAAACTCAAGCAATTGCATCAACTTCGAGCTTAGGGATCGATGGAAACGCCCCGAATAATGGGAACATTCAAAGACAAGGTTCTTTGACTTTACCAAGAACACTTAGCAGAAAAACAGTTGATGAAGTTTGGCGGGAATTGCTTGTAAGTAGTAGTAATAATGGAGTCAAAGATGGGGATTTGATTGGTCAAACGAATTTACAACAACAAGAAAGAGAACCAACATTAGGTGAGATGACACTTGAGGATTTCTTGCTGAAAGCAGGGGTAGTAAAGGAAGATCACCAAATTCAAACGAACCCGCGACCCGTTATACCTCAAAATGGGTCGTTTTTCTGGGAAGTTTCACAACCAAATGTCGAAAACAGCAGTTTCATATTCGGGTTTCAAAACCCAAATCAGAACAATGGGTTTAACGGGCCAACGGTTAACCGAATCACCGAGGCTAAAACAGGTGTGACCCTGCACCCAAAACCAAAGCCACAACCACAGCCACAGCCCCAGCCCATTTTTCCCAAACAAGCTGCTTTGGACTTCACGGCACCGTTGACCGGTCAACTGGCTAGTCCGGGGGCTAAAATGGGGAAGTTTGAGCAACCGGTTAAGACTAGTGTGGTCCAAGCTAGTGACAAAGAGAATGGAGTGATGAACATTAAAACACTTGGGGGTGTTTCGGTTAACTCTCCTCGGAATTTGATCCCGAAAAGTAATTTGGATTCGACTCCATCACCCCCGTTTTATGCGTTTGGTGAAGGCGATCTACGTGGCCCAAAACGCAGTGGGACTTTAGAGAAAGTGGTGGAGAGAAGGCGGAGAAGGATGATCAAGAACAGAGAGTCAGCTGCACGTTCTCGGGCCCGAAAGCAGGCGTATACTTTGGAATTGGAAGCAGAAGTTGCAAAACTTAAAGAAATCAACCATGAGTTGCTTAAAAAACAGGAAGAGATCATGGAGATGCAGAATAATCAGGTAGTGGAGAAGTTGAAAAGGCCTTGGGGAAGCAAAAGATTGTGCTTGAGAAGAACATTGACTGGACCTTGGACCAGATTAGCAAGCACATGA 1275 43.92 MSSFINFKNYGDTSQPELNCSKQMVANSPLTRQSSIYSLTFDELQSTLGGSGKDFGSMNMDELLKNIWSVEETQAIASTSSLGIDGNAPNNGNIQRQGSLTLPRTLSRKTVDEVWRELLVSSSNNGVKDGDLIGQTNLQQQEREPTLGEMTLEDFLLKAGVVKEDHQIQTNPRPVIPQNGSFFWEVSQPNVENSSFIFGFQNPNQNNGFNGPTVNRITEAKTGVTLHPKPKPQPQPQPQPIFPKQAALDFTAPLTGQLASPGAKMGKFEQPVKTSVVQASDKENGVMNIKTLGGVSVNSPRNLIPKSNLDSTPSPPFYAFGEGDLRGPKRSGTLEKVVERRRRRMIKNRESAARSRARKQAYTLELEAEVAKLKEINHELLKKQEEIMEMQNNQVVEKLKRPWGSKRLCLRRTLTGPWTRLAST 424
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fro12g02590 424 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 343 358 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Fro12g02590 424 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 32 416 IPR043452 GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0045893(InterPro)
Fro12g02590 424 CDD bZIP-plant-BZIP46 345 391 - -
Fro12g02590 424 SUPERFAMILY Leucine zipper domain 340 389 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Fro12g02590 424 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 338 395 - -
Fro12g02590 424 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 338 389 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Fro12g02590 424 Coils Coil 359 393 - -
Fro12g02590 424 SMART brlzneu 336 401 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Fro12g02590 424 Pfam bZIP transcription factor 340 391 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Fro12g02590 424 Gene3D - 338 395 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fro12g02590 K14432 ABA responsive element binding factor
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Event-related genes

Select Gene_1 Gene_2 Event_name
92794 Fro12g02590 Fro7g00864
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fro Fro-Chr11:5438664 Fro12g02590 Fro-Chr12:33747557 dispersed
Fro Fro-Chr12:33747557 Fro18g00768 Fro-Chr18:14374753 dispersed
Fro Fro-Chr17:8454371 Fro12g02590 Fro-Chr12:33747557 transposed
Fro Fro-Chr7:10303344 Fro12g02590 Fro-Chr12:33747557 transposed
Fro Fro-Chr12:33747557 Fro17g01305 Fro-Chr17:21328160 wgd
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Fro1g00024 . 82 270 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G03970 55.497 3.89e-57 182.0
Fro1g00587 WGDA 62 285 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35900 39.732 1.33e-36 128.0
Fro1g00692 WGDA 49 155 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 57.944 1.80e-33 115.0
Fro1g00772 ACH,WGDA 36 151 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G49760 37.903 4.17e-17 72.4
Fro1g00841 ACH,WGDA 1 302 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 54.303 1.56e-107 315.0
Fro1g00980 ACH,WGDA 9 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 47.674 4.24e-43 139.0
Fro2g00236 WGDA 1 143 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G62420 57.241 3.38e-53 163.0
Fro2g00388 ACH 1 382 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 49.272 1.78e-101 303.0
Fro2g00774 . 6 297 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 50.746 7.29e-95 282.0
Fro2g01530 . 17 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 49.324 3.64e-40 131.0
Fro3g00335 ACH 22 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 50.0 8.76e-38 126.0
Fro3g01138 ACH,WGDA 16 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 47.097 1.50e-40 132.0
Fro4g00667 ACH,WGDA 23 159 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G34590 52.113 2.50e-44 142.0
Fro5g00050 . 1 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 75.529 8.12e-179 496.0
Fro5g00082 . 27 339 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G06070 69.301 4.20e-151 433.0
Fro5g00144 . 147 469 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G19490 38.507 3.30e-41 151.0
Fro5g00286 . 65 285 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35900 33.628 5.84e-18 77.4
Fro5g00553 ACH 1 315 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 45.794 5.74e-73 224.0
Fro5g00595 ACH,WGDA 122 213 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G22850 46.739 1.84e-21 85.9
Fro5g00988 . 213 318 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 38.318 1.53e-15 73.9
Fro6g00073 . 65 135 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G49760 46.479 3.91e-15 65.9
Fro6g00257 WGDA 1 481 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G08320 58.48 0.0 568.0
Fro6g00438 WGDA 1 153 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G11260 72.549 2.90e-60 182.0
Fro6g01169 WGDA 7 337 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G43700 44.126 1.05e-71 224.0
Fro7g00491 ACH 274 350 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 75.949 2.21e-31 112.0
Fro7g00735 ACH 1 310 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 46.965 2.90e-82 248.0
Fro7g00751 ACH,WGDA 121 309 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 29.384 5.65e-18 80.5
Fro7g00864 ACH 1 392 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G49720 38.568 6.69e-72 228.0
Fro8g00023 . 93 452 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G68640 70.914 1.71e-158 454.0
Fro8g00218 WGDA 1 240 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G16770 53.125 2.28e-82 245.0
Fro8g00609 ACH 213 400 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 52.577 5.41e-53 172.0
Fro8g00610 . 36 201 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 70.482 4.17e-76 233.0
Fro8g00612 . 102 370 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 54.945 7.66e-83 251.0
Fro8g00613 . 1 90 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G32150 57.143 5.18e-23 88.2
Fro8g01175 ACH 1 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 52.326 2.83e-47 150.0
Fro8g01267 ACH 5 155 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G49760 38.411 8.02e-21 82.0
Fro8g01386 . 16 160 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G18160 35.616 4.96e-21 82.4
Fro9g00872 ACH 41 300 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 32.014 6.33e-27 107.0
Fro9g01149 ACH 9 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 51.852 7.67e-44 141.0
Fro9g01616 . 61 276 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G24800 47.619 6.52e-53 173.0
Fro10g00218 . 1 553 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 55.719 0.0 533.0
Fro10g00287 . 1 258 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35040 60.662 1.11e-108 313.0
Fro10g01013 WGDA 23 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 55.0 3.72e-46 149.0
Fro11g00550 ACH 20 159 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G34590 51.389 9.60e-40 130.0
Fro11g00551 ACH,WGDA 20 159 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G34590 51.389 4.43e-39 129.0
Fro11g00641 ACH 21 416 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G45249 51.923 9.48e-111 329.0
Fro11g00805 ACH,WGDA 1 302 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 54.678 1.34e-107 315.0
Fro11g00904 ACH,WGDA 29 159 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 34.351 3.30e-15 68.2
Fro11g01054 ACH,WGDA 28 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 59.028 6.05e-46 147.0
Fro11g01340 WGDA 62 285 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35900 39.655 1.47e-34 125.0
Fro11g01415 . 1 302 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G28770 39.15 8.99e-70 222.0
Fro11g01445 . 57 517 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 50.617 7.74e-122 365.0
Fro11g01464 WGDA 2 241 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G16770 53.282 9.38e-82 243.0
Fro11g01630 . 21 161 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 52.027 3.72e-39 130.0
Fro11g02901 ACH 1 367 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 54.082 9.78e-115 335.0
Fro11g03429 . 130 285 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35900 33.951 1.81e-13 63.9
Fro12g00607 WGDA 1 143 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G62420 50.345 8.74e-48 149.0
Fro12g01947 ACH 211 300 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 54.444 1.29e-23 98.2
Fro12g01979 . 146 313 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G44080 45.876 1.30e-33 121.0
Fro12g02271 . 1 308 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 56.467 1.15e-101 299.0
Fro12g02313 ACH 1 308 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 56.467 1.15e-101 299.0
Fro12g02331 . 112 309 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06960 26.126 1.23e-17 78.6
Fro12g02365 ACH 112 309 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06960 26.126 1.23e-17 78.6
Fro12g02541 ACH 39 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 44.094 7.19e-30 105.0
Fro12g02590 ACH 1 392 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G49720 46.925 4.01e-98 297.0
Fro13g00312 WGDA 53 155 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 61.538 2.65e-36 121.0
Fro13g00325 ACH 53 155 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 62.5 1.07e-36 122.0
Fro13g00460 . 95 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35040 57.143 8.24e-18 74.7
Fro13g00498 ACH 1 381 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 45.658 3.55e-91 277.0
Fro13g00757 . 1 307 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 51.988 1.72e-93 278.0
Fro13g01086 . 23 720 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40950 47.925 5.06e-165 490.0
Fro13g01106 . 6 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 63.746 1.47e-145 415.0
Fro13g01146 . 5 297 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 51.125 4.69e-82 248.0
Fro14g00052 . 40 124 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 37.647 1.75e-15 67.4
Fro14g00053 . 18 144 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G62420 35.821 1.16e-15 67.4
Fro14g00566 . 52 339 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G06070 63.245 5.85e-119 349.0
Fro14g00615 . 121 313 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 26.749 1.30e-20 87.8
Fro14g00616 . 120 318 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 28.163 6.26e-21 89.0
Fro14g01847 . 146 720 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40950 49.261 2.86e-131 401.0
Fro15g00384 WGDA 1 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 76.737 0.0 502.0
Fro15g00437 . 1 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 67.576 2.78e-154 432.0
Fro15g00591 . 21 360 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G06070 64.225 1.73e-145 419.0
Fro15g01471 WGDA 101 213 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G22850 38.938 7.72e-22 85.9
Fro15g02308 ACH 28 349 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 56.647 5.68e-107 316.0
Fro16g00117 WGDA 14 337 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G43700 47.353 1.21e-80 247.0
Fro16g02026 WGDA 1 152 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G11260 66.879 8.67e-53 164.0
Fro16g02027 . 1 152 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G11260 67.901 2.07e-52 162.0
Fro16g02491 ACH,WGDA 1 481 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G08320 60.687 0.0 592.0
Fro17g00525 . 1 440 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G36270 47.558 3.86e-100 304.0
Fro17g00660 . 23 416 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06839 55.83 1.89e-163 469.0
Fro17g00755 . 15 297 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 52.885 5.83e-87 261.0
Fro17g01211 ACH,WGDA 37 171 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 45.205 1.63e-34 117.0
Fro17g01305 ACH,WGDA 21 415 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G45249 52.644 1.81e-110 329.0
Fro18g00598 . 15 338 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G43700 46.471 1.83e-79 244.0
Fro18g00713 ACH,WGDA 24 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 48.611 1.52e-35 119.0
Fro18g00768 ACH,WGDA 6 416 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G45249 52.489 5.51e-117 345.0
Fro18g01094 ACH 1 365 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 53.403 5.20e-107 315.0
Fro10000077.1g00009 . 16 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 46.452 1.58e-39 130.0
Fro10000195.1g00001 . 49 277 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G24800 48.79 2.73e-60 193.0
Fro10000165.1g00003 . 1 376 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 62.895 3.62e-151 431.0
Fro10000241.1g00005 . 27 159 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G34590 45.255 6.71e-30 104.0
Fro10000252.1g00012 . 1 392 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G49720 46.939 2.71e-98 297.0
Fro10000030.1g00007 . 217 285 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35900 53.623 8.54e-14 65.1
Fro10000311.1g00006 . 1 152 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G11260 67.901 2.07e-52 162.0
Fro10000311.1g00008 . 1 152 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G11260 67.516 8.56e-54 166.0
Fro10000196.1g00014 . 49 277 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G24800 48.387 8.76e-59 189.0
Fro10000435.1g00006 . 1 481 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G08320 60.417 0.0 592.0
Fro10000026.1g00011 . 217 285 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35900 53.623 1.09e-13 64.7
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Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
Fro bZIP_1 4e-12 CL0018 TF bZIP