Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fro12g02595 | ATGGCGAAAATCAAATGCGGATGCAATGTGTTCTTCGCCACAGTTGTGCTGTTCGCGTACAAATTTGTGCTGTTCGCGTATGCTTCATCGCTCAAGGAAGGACAAACGTGCGTGGATAATAGCAACTGTGACGCAGGTTTACATTGTGAGGCTTGTGTTGCAGACGGCAATGTTCGTCCTAGATGTACTCGCCTTCAACCTATCAGTCCCTTTTCTAAGGTGAAAGGATTGCCGTTTAATCGGTACTCGTGGTTAACGACGCATAATTCGTTCGCTAAATTTGGAGAGAAGTCGGCTACCGGTTCCGTCGTTCTAGCTCCGACGAACCAGCAGGACTCTGTTAGTTCGCAGCTCGATAACGGTGTGAGAGGGCTGATGCTTGATATGTATGACTTTGAGAATGACATTTGGTTATGCCATTCATTTGGTGGCAAATGCTTCAACTACACAGCTTTTCAACCTGCTATCAATGTTCTGAAAGAGATTCGATTTTTCCTAGAAAAGAATCCAACTGAAATCGTAACCCTAATCATTGAAGATTATGTTACCTCACCAAAGGGTCTAACTAATGTCTTCAATGCTGCTGGTCTGAGGAAATACTGGTTTCCAGCAGCCCAAATGCCGAGTGATGGTAGGGACTGGCCTACAGTTGACTCAATGGTTCGCCAGAATTACCGTTTGGTAGTTTTCACTTCCAAATCTTCTAAACAGGCTACTGAAGGGATTGCCTATGAGTGGAAGTACTTGGTTGAAAACCAATATGGAACAGATGGGATGAAAAGCGGTTTATGCCCGAACCGTGCTGAATCAGCTGCAATGAACACTACATCAAGATCACTTGTTTTAATGAACTATTTCCCAGATACACCTGATATTACCCAAGCTTGCAAGCACAATTCAGGCCCATTAATCAGCATGATGAACACATGCCATGATGTCGCTGGTAAACGGTGGCCTAATTTCATTGCTGTTGACTTTTACAAGAGGAGTGATGGTGGGGGTGCACCAGCAGCTGTAGATATGGCTAACGGTCAGCTGGTTTGTGGTTGTAACACCATTGCAGCATGCAGGCCAAACATGACCTTTGGAGCTTGTAACCTGCCAGAGGCTGGGGCTGCTCCAACTCCAATTTCAGCATTAAAAACCTCGGGGAACATCGGTGGTCGACCGGGTCATCTTGGATGGTTGTTTGGGTCAGGTTTGATTGTTATAACCTTGTGTTTTTAA | 1227 | 45.23 | MAKIKCGCNVFFATVVLFAYKFVLFAYASSLKEGQTCVDNSNCDAGLHCEACVADGNVRPRCTRLQPISPFSKVKGLPFNRYSWLTTHNSFAKFGEKSATGSVVLAPTNQQDSVSSQLDNGVRGLMLDMYDFENDIWLCHSFGGKCFNYTAFQPAINVLKEIRFFLEKNPTEIVTLIIEDYVTSPKGLTNVFNAAGLRKYWFPAAQMPSDGRDWPTVDSMVRQNYRLVVFTSKSSKQATEGIAYEWKYLVENQYGTDGMKSGLCPNRAESAAMNTTSRSLVLMNYFPDTPDITQACKHNSGPLISMMNTCHDVAGKRWPNFIAVDFYKRSDGGGAPAAVDMANGQLVCGCNTIAACRPNMTFGACNLPEAGAAPTPISALKTSGNIGGRPGHLGWLFGSGLIVITLCF | 408 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fro12g02595 | 408 | PANTHER | UNCHARACTERIZED | 41 | 356 | IPR051057 | GO:0008081(PANTHER) | |
| Fro12g02595 | 408 | SUPERFAMILY | PLC-like phosphodiesterases | 76 | 347 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Fro12g02595 | 408 | CDD | PI-PLCc-At5g67130-like | 69 | 343 | - | - | |
| Fro12g02595 | 408 | ProSiteProfiles | Phosphatidylinositol-specific phospholipase X-box domain profile. | 78 | 186 | - | - | |
| Fro12g02595 | 408 | Gene3D | Phosphatidylinositol (PI) phosphodiesterase | 69 | 333 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fro12g02595 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 92797 | Fro12g02595 | Fro4g00730 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fro | Fro-Chr11:9373801 | Fro12g02595 | Fro-Chr12:33779938 | dispersed | |
| Fro | Fro-Chr12:33779938 | Fro5g00633 | Fro-Chr5:13030858 | dispersed | |
| Fro | Fro-Chr11:8216783 | Fro12g02595 | Fro-Chr12:33779938 | wgd | |
| Fro | Fro-Chr12:33779938 | Fro4g00730 | Fro-Chr4:7248681 | wgd |