AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fro13g01370 ATGGCCATTCCTGATGTTTTTCTGCAGGGAGAACATGATCATTTCTCATCGTCATCTCAATTCGATCATACCAAAGGTGATGCTAAATCGCGAGGATTTGAGCTGGAGAAGAAAATTGAATATCTTGAGAGCTTGAACGATAGGGTTAGTAACAGACGAGCACGTAGATGGATAAATGATCGTATTCTGTTGGAGCTTGTACCTCGTCTGACTGGAGATGAAATCAGAGGGTTGTTTGCTCCACCACCTTGGGGTGATGAGCCACAACCGTCACCATTTTGCATGACAAATGTGGGGGAGTGGGACAAATTTAGGAATATAGACATGGACAAAGAGGCTGGTGCAATAGCGGCTCTTAAAGGTTCCTCATCAAAGAAGAAAAGTAGTGTGGATGCTGATAAGATAGCTGCATTAACTGCATGGCACAGGGTTGACTGCAGAACTAGAGAGGCATTTCGCCGAAGCTTCCTTCCAGAACTTGTTAACGGTTTTGAGGAGAACATACGGGCCTTTGTCTCAGAGGCAGCTAATGAGGAGGTTCTTGTGATGTATGCTCAAGATCCTTTCCATAGGCTGTTACTTCATGGTGTTTGCGAGTTCTACAACTTGGTGTCAACAACGGAGTCAGAGACCAAAGGTACAAAGGTCTTGAAGATGACCAAAATCAAGAAGAAAAAGTCAGGCAACAACGAGCTCCCGACCATCACCCTTTGCGAGTTCCTGAAAATGGCAAAGGGTGGTTTTTGGTAG 750 44.93 MAIPDVFLQGEHDHFSSSSQFDHTKGDAKSRGFELEKKIEYLESLNDRVSNRRARRWINDRILLELVPRLTGDEIRGLFAPPPWGDEPQPSPFCMTNVGEWDKFRNIDMDKEAGAIAALKGSSSKKKSSVDADKIAALTAWHRVDCRTREAFRRSFLPELVNGFEENIRAFVSEAANEEVLVMYAQDPFHRLLLHGVCEFYNLVSTTESETKGTKVLKMTKIKKKKSGNNELPTITLCEFLKMAKGGFW 249
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fro13g01370 249 Pfam R3H-associated N-terminal domain 35 154 IPR025952 -
Fro13g01370 249 ProSiteProfiles R3H domain profile. 158 226 IPR001374 GO:0003676(InterPro)
Fro13g01370 249 PANTHER R3H DOMAIN-CONTAINING PROTEIN 4 9 246 IPR039629 -
Fro13g01370 249 Gene3D - 154 246 IPR036867 GO:0003676(InterPro)
Fro13g01370 249 SUPERFAMILY R3H domain 141 220 IPR036867 GO:0003676(InterPro)
Fro13g01370 249 CDD R3H 164 215 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fro13g01370 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
396093 Fro13g01370 Fro14g01337
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fro Fro-Chr13:23142631 Fro14g01337 Fro-Chr14:21254750 wgd