AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fro14g00996 ATGTCAAGGTTCTACGTGATCAGAAATATTAAGAGAGCAGCACAGGTGATTCGAACAAGCAATTGTGGTATTCATTTAGAAGATGGGTCAATCGTTAGATCTGGTTTTAACAACTTCAAATACAGGATGTACCCTAGTAATAGAGGGTTTGCTTTCATCTTGGCATGCAAATCCAAGTTTTCTGTTGGCAATAGTACATTCTACAGCAGAAACTTTTCCTCTTATTCAGCCAATAACACAATAACACATCATGCCCAAAATGCTTGGAGGAAGCTTTCCATAAGTTTGGATCGAGATAAGCAAATATCTGGCATAAATAGGATTGCTCAAGCATTTAGTTTGGCATTAAGTCGCTCATATGTTGTTCTTCCTGGTATATTTGCCTTCACATGTGGCAATATGGTGTTAGCAGATGCAGGGTCAAACGTTGGCCCTTTTCAGCCAAGAAATACTTTATACACACGTGCTGAAAATGGACATGCGTTTCTGATCTCATCATTGATTTTGGTATTCGAAGGTTTCATATTGCTGTTCAGAGCTATGTATTTGGCAATTTTGTTCTCACCTAGTATGGCAATGGCTCCATTTGCAGAGTATTTCGGGACCTCATCTAGACAACATTGGCTTCATCTTGTACGCCGTACTTTGGAAATAGCAGGTCCTGCATTTATAAAATGGGGTCAATGGGCCGCCACACGGCCAGACCTTTTCCCTACAGACTTGTGCACGGAGCTCTCTAAGCTTCACAGCAAGGCTCCTGAACATAGCTTTGCTTATACAAGAAAGACAGTTGAAAAGGCTTTTGGTCGTAAAATATCAGATGTTTTTGATGATTTTGAGGAACTTCCGGTAGCTTCGGGAAGCATTGCACAAATTCATCGAGCCTCTTTGAGGTATGGATATCGTGGCAAGCGTGACAAGCCTTTATTAGTTGCAGTTAAAGTTAGACATCCTGGGGTTGGTGAATCAATTAAAAGAGATTTTGAGATTATTAATGTAGTTGCAAAGATATCTAAATTTATTCCTACACTTAATTGGTTGAGATTAGATGAAAGTGTTCAACAATTTGCAGTCTTTATGATGTCACAAGTCGATCTTGCTCGGGAAGCTGCTCATTTGAGTAGATTTATATATAATTTTCGCAGCTGGAGGGATGTTTCTTTCCCTAAACCTGTATATCCACTTGTACATCCGGCTGTTTTGGTGGAAACTTTTGAACAAGGTGAAAGTGTGTCACGTTATGTTGATGAACTTGAAGGACATGTTCGACTTAAGAGTTCTGTTGCGCACATTGGGACCCATGCTCTTCTAAAAATGCTGCTGGTGGACAACTTCATTCATGCTGACATGCATCCTGGAAATATTCTTGTGAGGAGCAAACCATCTCGTAAAGGGATCTTCAAATCGAAGCCGCATGTCATATTCCTTGATGTAGGCATGACTGCTGAACTTTCAAAGAGTGATAGAGTCAATTTGTTGGAATTTTTTAAGGCTGTTGCTCGTAGAGATGGAAAAACTGCGGCAGAATGCACCTTGAGGCTTTCAAAACAACAGAATTGTCCTAATCCTCAGGCCTTTATCAAGGAAGTTACTGAGTCTTTTGATTTTTGGGGTAGTCCAGAGGGTGACATTGTACATCCTGCTGATTGCATGCATCAAGTGCTAGAGCAAGTGAGACGTCACAGAGTCAATGTTGATGGAAATGTCTGCACTGTCATGGTTACAACTCTGGTTCTTGAGGGTTGGCAACGGAAGCTTGACCCTGATTACAATGTGATGCACACACTTCAAACATTGTTGCTGAAAGAAGACTGGGTGAAGTCACTAACCTACACAATCGAAAGCTTGATGGCTCCATAG 1860 40.91 MSRFYVIRNIKRAAQVIRTSNCGIHLEDGSIVRSGFNNFKYRMYPSNRGFAFILACKSKFSVGNSTFYSRNFSSYSANNTITHHAQNAWRKLSISLDRDKQISGINRIAQAFSLALSRSYVVLPGIFAFTCGNMVLADAGSNVGPFQPRNTLYTRAENGHAFLISSLILVFEGFILLFRAMYLAILFSPSMAMAPFAEYFGTSSRQHWLHLVRRTLEIAGPAFIKWGQWAATRPDLFPTDLCTELSKLHSKAPEHSFAYTRKTVEKAFGRKISDVFDDFEELPVASGSIAQIHRASLRYGYRGKRDKPLLVAVKVRHPGVGESIKRDFEIINVVAKISKFIPTLNWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRSWRDVSFPKPVYPLVHPAVLVETFEQGESVSRYVDELEGHVRLKSSVAHIGTHALLKMLLVDNFIHADMHPGNILVRSKPSRKGIFKSKPHVIFLDVGMTAELSKSDRVNLLEFFKAVARRDGKTAAECTLRLSKQQNCPNPQAFIKEVTESFDFWGSPEGDIVHPADCMHQVLEQVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPDYNVMHTLQTLLLKEDWVKSLTYTIESLMAP 619
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fro14g00996 619 CDD ADCK2-like 247 537 IPR044095 -
Fro14g00996 619 Pfam ABC1 atypical kinase-like domain 247 509 IPR004147 -
Fro14g00996 619 PANTHER AARF DOMAIN CONTAINING KINASE 2 (PREDICTED) 69 611 IPR052402 -
Fro14g00996 619 SUPERFAMILY Protein kinase-like (PK-like) 254 587 IPR011009 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fro14g00996 K08869 aarF domain-containing kinase
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fro Fro-Chr14:15071669 Fro9g01344 Fro-Chr9:26322729 dispersed
Fro Fro-Chr11:19622057 Fro14g00996 Fro-Chr14:15071669 wgd