Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fro14g01227 | ATGAGACTCTGCTGCTTCTCCTCGACTCCGGTTGATGAAGATGAGCCTGACAGCCATCCTGAGTTTGCAGGAGGTAATGTGACTCTGATTACTACCAAGAATGCTTGGGACCAAAAGCTGTCAGAAGCAAAGATTCAAGGCAAAGTAGTGATTGCCAACTTCAGTGCAACTTGGTGTGGTCCATGCAAATCAATTGCACCACACTATGTTGAGCTATCAGAGAAGTATCCTTCTCTTATGTTCCTGACCATCGACGTTGATGAGTTAACGGAGTTTAGCACAGAAATGGATGTAAAAGCTACTCCAACATTCTTCTTCTTTAGAGACGGTAAACAGATTGATAAACTTGTGGGAGCCAACAAGCCTGAACTGCAGAAAAAGATAACCACCATTGTTGATTCACAGGTCCCAACTGGTCAGAAATAA | 426 | 43.43 | MRLCCFSSTPVDEDEPDSHPEFAGGNVTLITTKNAWDQKLSEAKIQGKVVIANFSATWCGPCKSIAPHYVELSEKYPSLMFLTIDVDELTEFSTEMDVKATPTFFFFRDGKQIDKLVGANKPELQKKITTIVDSQVPTGQK | 141 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fro14g01227 | 141 | PANTHER | THIOREDOXIN | 25 | 130 | IPR050620 | - | |
| Fro14g01227 | 141 | PRINTS | Thioredoxin family signature | 97 | 108 | - | - | |
| Fro14g01227 | 141 | PRINTS | Thioredoxin family signature | 58 | 67 | - | - | |
| Fro14g01227 | 141 | PRINTS | Thioredoxin family signature | 50 | 58 | - | - | |
| Fro14g01227 | 141 | FunFam | Thioredoxin | 24 | 133 | - | - | |
| Fro14g01227 | 141 | ProSiteProfiles | Thioredoxin domain profile. | 13 | 133 | IPR013766 | - | |
| Fro14g01227 | 141 | CDD | TRX-family | 40 | 128 | - | - | |
| Fro14g01227 | 141 | Pfam | Thioredoxin | 28 | 129 | IPR013766 | - | |
| Fro14g01227 | 141 | SUPERFAMILY | Thioredoxin-like | 23 | 131 | IPR036249 | - | |
| Fro14g01227 | 141 | ProSitePatterns | Thioredoxin family active site. | 51 | 69 | IPR017937 | - | |
| Fro14g01227 | 141 | Gene3D | Glutaredoxin | 3 | 139 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fro14g01227 | K03671 | thioredoxin |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 396078 | Fro13g01321 | Fro14g01227 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 2519627 | Fro | Fro12g01713 | Fro-Chr12:22687145 | Fro14g01227 | Fro-Chr14:19758637 | |
| 2522687 | Fro | Fro14g01227 | Fro-Chr14:19758637 | Fro15g01627 | Fro-Chr15:30986160 | |
| 2563003 | Fro | Fro13g01321 | Fro-Chr13:22765144 | Fro14g01227 | Fro-Chr14:19758637 |