AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fro14g01229 ATGAATCGGAATTCTTCTAAGGACTCATTGATCATCGGTCGGAATCTCCACGTTAATGGTGTTTACAATGCTCCGGTCACCGGATTATTATCTCACCAGCGACTCAGGAGTTTCACCACCACCACCACCACCACTACCGAAGATTTTGGCAACAGTAACAGCAGCAACGTAGATCTATCCTCCCGTAATCGTCGTACGCTCTCCGTCGCATCTTCCGATGAATCCGACTTGCAGGTGAGGTTGGAAAAGCTTTCTACTGGATCAATCAAACCTGCAAAAAGCGTAGATGATCTACTTCTATCTAATGAAGGGGGAAAGCATGATTATGACTGGCTATTGACTCCTCCAGAAACTCATCTACATCCATCTTCAAATGGAAATGAATCTCAACCAAAATCAGTGGCCCCAAAAAGAATTTCTTCAGTTAGATCAGGCTCCACAAATAGAACCTCAAGGCTTTCTGTTTCTCAATCTGAGAGTAAGCATCCTTCAAGACCAGCAAGAAGCAGTTCACTGACTCGCCCATCAATCGCTAGCGTCCAAAACACAAACAGTTATTCTAATAGTTTAAACACCAGCTCTGCTTCTGTCTCTTCTTACATAAGACCATCCACCCCGACTAACCGTCTACCATCAGCCTCCAGATCCTCCACCACTTCTTCCCTTACAACACCTTCTAGAAGCCGTCCATCCTCCACCACCACGACTTACACTGACAAAACCATTAGACCATCAACTCCTACTACCCGTCCCCAATCACCTACTGTCCGACCAGCTTCTAGGCCATCAACTCCAACGCGTAGGAACCCAACACCTTCTAGTTCTATATCTCCATCTATTAACAACCGGATTGTGGGACCCAAATCCAGATCAAACTCTTCTGTCTCACGGGTCCGGCCCATCAATCTTCCTGATTTCCCAAATGATACGCCGCCAAATCTTAGAACAAGTGTCCCAGAAAGGCCTGTGTCTGCTGGCAGGTCCAGACGAGGTGCAGCAATGACTGTGAAGGGAAATGTAGAGAATACAAAGACAAAACGACCGTCGTCGCCCCTTGTCCCTAGTGGTACACTTGCAGCACCACCAGGATGGGGACGATCACACGCTAACGGGCATATGCTTGAACCAGTTACAAGAAAACCAATAAAGGTATTAAATTCAGAGCCTGGTACAGAGTTTGGGAGGAGCATCTCAAAGAAATCACTTGACATGGCCATAAAACATATGGATATAAGAACAAGAGGCCTGCGCCCACTTTCCGGGTCAACGCTCTTTCCTCAAAGCATTCGATCGAAGAACAAAGTGAAACCCGTAACCACAGAACATAATAGTGCATATTCTTCTAAACTAGCACGTGTAGATGTATGCGAGAGCTTGAGGTACGATACGATTTTACTAAAGGAAGACCTGAAGAACACAAGTTGGTTGCATAGTGAAGATGAAAATAGTGATCAAAGTCTATTGTTTGATAATGGATTTGAGCCACTCCCTGAACCTTTTGCACCCTTGTGA 1512 45.57 MNRNSSKDSLIIGRNLHVNGVYNAPVTGLLSHQRLRSFTTTTTTTTEDFGNSNSSNVDLSSRNRRTLSVASSDESDLQVRLEKLSTGSIKPAKSVDDLLLSNEGGKHDYDWLLTPPETHLHPSSNGNESQPKSVAPKRISSVRSGSTNRTSRLSVSQSESKHPSRPARSSSLTRPSIASVQNTNSYSNSLNTSSASVSSYIRPSTPTNRLPSASRSSTTSSLTTPSRSRPSSTTTTYTDKTIRPSTPTTRPQSPTVRPASRPSTPTRRNPTPSSSISPSINNRIVGPKSRSNSSVSRVRPINLPDFPNDTPPNLRTSVPERPVSAGRSRRGAAMTVKGNVENTKTKRPSSPLVPSGTLAAPPGWGRSHANGHMLEPVTRKPIKVLNSEPGTEFGRSISKKSLDMAIKHMDIRTRGLRPLSGSTLFPQSIRSKNKVKPVTTEHNSAYSSKLARVDVCESLRYDTILLKEDLKNTSWLHSEDENSDQSLLFDNGFEPLPEPFAPL 503
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fro14g01229 503 MobiDBLite consensus disorder prediction 483 503 - -
Fro14g01229 503 PANTHER GASTRIC MUCIN-LIKE PROTEIN 53 485 - GO:0043622(PANTHER)|GO:0055028(PANTHER)
Fro14g01229 503 MobiDBLite consensus disorder prediction 110 336 - -
Fro14g01229 503 MobiDBLite consensus disorder prediction 118 299 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fro14g01229 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
93165 Fro14g01229 Fro17g00107
93166 Fro14g01229 Fro18g00058
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2522688 Fro Fro14g01229 Fro-Chr14:19784931 Fro15g02270 Fro-Chr15:36823164
2566722 Fro Fro14g01229 Fro-Chr14:19784931 Fro17g00107 Fro-Chr17:984751
2567107 Fro Fro14g01229 Fro-Chr14:19784931 Fro18g00058 Fro-Chr18:827219
2567492 Fro Fro14g01229 Fro-Chr14:19784931 Fro3g00633 Fro-Chr3:7768565