AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fro14g01236 ATGTCTACTGTTGTTGATCGTCTTCTTCAATCTCATCTCGCCGGAAACGATCGGCATTTGAATCATGTGAGGCGTATTCACGACCTCCGATTACCGGATCTCACCTCCAAAACACTCGTCGATTTCACCGGTTTTTCTCTCCGATCAAAGCCGATCAAGCTAGATTTACTAGCTAATCGATCGATTACACCTTGTGCTGGTGGTGACGGTGGTGGTTCCGGTGTCGGTCACGGCGGTGGCGGAGGAGGTGACGGTGGTGGTAGCGACCGGAGCGGCGGCGGCGGCGGCGGAAAGTTCGATGACTCAGGTTCGTTAGATAGTTTTGGTCCAATTGGGGCTTTTCTTAGTGGTTGGAGATCTAGGGTTGCAGCTGATCCCCAATTTCCATTCAAGGTGTTAATGGAAGAAGTGGTTGGTGTGAGTGCAAATGTGGTTGGGGACATGGCGACTCGGCCGAATTTCGGGTTAAACGAGCTCGATTTCGTGTTCTCGACACTAGTCGTCGGATCAATCATGAATTTCACCCTAATGTATCTGTTAGCACCCACCATGACATCTGGATCAGCAACCCTCCCTTCGATTTTCGCCAGTTCGCCAGCGAGCCACATGTTTGAGCCCGGGGCGTACACCCTGGTTAACCGGCTAGGGACGTTTGTGTACAAAGGAACCCAGTTTGCAGCCGTGGGGTTCGCCGCTGGTTTGGTTGGAACCGCATTGTCAAACGGGCTGATCAAGATGAGGAAAAAGATGGACCCTAGCTTCGAGTCTCCAAACAAGGCTCCACCCACTGTTTTGAACGCGATCACATGGGCGATTCATATGGGTATAAGCAGTAATCTGAGGTACCAAAGCTTGAATGGGATTGAGTTCATGCTGGCAAAGGGGTTGCCACCATTGTTGTTCAAGAGCTCAGTGGTTGGGTTAAGATTGGTTAACAATGTTCTTGGTGGTATGACGTTTGTGATGCTCGCGAGGATGACTGGATCGCAAAGCGCTAGTGGAGATGAAGACAGGATTGCTGATGAAGAGAGCTCAGATGAGGAGAAGAAGCTATTGAGCAATGAAATTGCTTCAAAGTAA 1080 50.19 MSTVVDRLLQSHLAGNDRHLNHVRRIHDLRLPDLTSKTLVDFTGFSLRSKPIKLDLLANRSITPCAGGDGGGSGVGHGGGGGGDGGGSDRSGGGGGGKFDDSGSLDSFGPIGAFLSGWRSRVAADPQFPFKVLMEEVVGVSANVVGDMATRPNFGLNELDFVFSTLVVGSIMNFTLMYLLAPTMTSGSATLPSIFASSPASHMFEPGAYTLVNRLGTFVYKGTQFAAVGFAAGLVGTALSNGLIKMRKKMDPSFESPNKAPPTVLNAITWAIHMGISSNLRYQSLNGIEFMLAKGLPPLLFKSSVVGLRLVNNVLGGMTFVMLARMTGSQSASGDEDRIADEESSDEEKKLLSNEIASK 359
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fro14g01236 359 MobiDBLite consensus disorder prediction 67 99 - -
Fro14g01236 359 Pfam Protein RETICULATA-related 121 288 IPR021825 -
Fro14g01236 359 MobiDBLite consensus disorder prediction 335 359 - -
Fro14g01236 359 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 58 332 - -
Fro14g01236 359 MobiDBLite consensus disorder prediction 330 359 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fro14g01236 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
396079 Fro13g01322 Fro14g01236
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2543581 Fro Fro15g01763 Fro-Chr15:32117423 Fro14g01236 Fro-Chr14:19875747
2545149 Fro Fro2g01146 Fro-Chr2:11378699 Fro14g01236 Fro-Chr14:19875747
2563004 Fro Fro13g01322 Fro-Chr13:22771384 Fro14g01236 Fro-Chr14:19875747