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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fro14g01237 ATGAGTCTTCAATTTCGAAGTCCAGTGAAGCTTGTTCTGGTTATTTGCTTCTTCTGGTGGCCAGTTGTTGAATCTCAAATATCTAATCCTCTACCAAAGCCTGCGAGGGCTCTTGATGCGACCTTACAGGACTATGCGTATCGCGCATTTGTTCGTCCTCGTACTGGAATTCCCTTTGATGGTATTGTTCCTCCATATTTGACTGGGATTAAGATATCAGCAATGAGGCTCAGAAGTGGTAGTTTGTATCGTAGAGGCGTTCAAAACTACAAAGAATTCGTAATTCCGGTTGGCATAAGAGAGCAACCATATGTGGAGAGACTGGTTCTGGTCTATCAAAACTTAGGAAATTGGTCCACAACTTATTACTCGTTACCTGGTTACATTTATCTAGCTCCCGTATTAGGTCTTCTTGCTTATAATGGTTCAGATCTGTCAGCTTCTAATCTACCAGAACTCGACTTTTGGGCTTCTGAGGAAGCCATTACGATACATTTTGGAAGAATGCGCCCGGTACCAGTTGGGTTGGTTGCAAAGTGTGCTTGGTTTGATCTAAATGGTCAGGTGAATTTCACAAATTTGTTATCTGGGAATGTATGTTCAACCACTGAACAGGGGCATTTCTCCATTGTAGCTGAATCAGCTGCCCCTCCTGTTCCAACACCTCCTGCACCACCTCAACCTGCACCATCAAAACCTACACCTAGTAGTAGAAAGAACAACGAGGCTAGGATTTGGGGTATTATTGGTTCAGTAACTGGTGGAACCGCGTTGCTGGTGTTATTGGTGTTGTTTATATTGTGGGCGTGGCGATACAAAAAGAGGAAAAGAATGCGTGAACTAGAAAGGGCTGCAGATGCTGGTGTAGCATTGAGGATGACCAGAATTGGGAGCATGAGAGCACCATTTGCATTGGCCACAAGAACAATGCCGAATTTTGAAAGCGACTTTGATGCTTGA 960 43.96 MSLQFRSPVKLVLVICFFWWPVVESQISNPLPKPARALDATLQDYAYRAFVRPRTGIPFDGIVPPYLTGIKISAMRLRSGSLYRRGVQNYKEFVIPVGIREQPYVERLVLVYQNLGNWSTTYYSLPGYIYLAPVLGLLAYNGSDLSASNLPELDFWASEEAITIHFGRMRPVPVGLVAKCAWFDLNGQVNFTNLLSGNVCSTTEQGHFSIVAESAAPPVPTPPAPPQPAPSKPTPSSRKNNEARIWGIIGSVTGGTALLVLLVLFILWAWRYKKRKRMRELERAADAGVALRMTRIGSMRAPFALATRTMPNFESDFDA 319
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fro14g01237 319 PANTHER PROTEIN, PUTATIVE (DUF1191)-RELATED 13 317 IPR010605 GO:0016020(PANTHER)
Fro14g01237 319 Pfam Protein of unknown function (DUF1191) 34 212 IPR010605 -
Fro14g01237 319 MobiDBLite consensus disorder prediction 214 239 - -
Fro14g01237 319 MobiDBLite consensus disorder prediction 216 233 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fro14g01237 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
93167 Fro14g01237 Fro17g00112
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2519618 Fro Fro12g01701 Fro-Chr12:22422166 Fro14g01237 Fro-Chr14:19892494
2521226 Fro Fro13g01206 Fro-Chr13:21355146 Fro14g01237 Fro-Chr14:19892494
2522695 Fro Fro14g01237 Fro-Chr14:19892494 Fro17g00437 Fro-Chr17:4595085
2543108 Fro Fro14g01237 Fro-Chr14:19892494 Fro17g00112 Fro-Chr17:1027374