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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fro14g01262 ATGCAGATCATGAAAACGAGACGACGATCCGACATGAGCCGACGAGCCTGGAACCTGCTGCGGCTCGCGTTATTATGGGCTCGAAAAGGCGGGGTCTTTGTGCTCAAGAAAAGGGTCATGCTTGACCTGACCCATTTGGTCAAGAGCCTAGGTCAATCAAAGAAGGGCAATGGTGCATTACAATATGGCGACCGACAGCTATCGTTTGATGCGACTCCAATCATCCATGTTAGGATGCACCGGCCCAACTCGATGAGGTTCAGGATGCCTCACATTCCTTGCATTAATCCACACGTTGAGTGTTCGGATTTGTTTGAGTTTGATGATGAGAGCGATTGGTACTCGCGTTGTGAGGCGCGAACGAGTTTCTTGATCGCGAATGGTGAAGAAGATGATGATGAGTACGATGGATATGATGAGCAAAGATGTGAGGAACAAGAAGTGGGAATTGATATTAAGGCGGAAGAGTTTATAGCTAACTTCTATGAGCAGCTTAAGCTTCAAAAGCAACTTAATACTAAAAGAAAGCGCGACGACTAG 540 46.85 MQIMKTRRRSDMSRRAWNLLRLALLWARKGGVFVLKKRVMLDLTHLVKSLGQSKKGNGALQYGDRQLSFDATPIIHVRMHRPNSMRFRMPHIPCINPHVECSDLFEFDDESDWYSRCEARTSFLIANGEEDDDEYDGYDEQRCEEQEVGIDIKAEEFIANFYEQLKLQKQLNTKRKRDD 179
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fro14g01262 179 Pfam Cotton fibre expressed protein 150 170 IPR008480 -
Fro14g01262 179 PANTHER AVR9-CF-9 RAPIDLY ELICITED PROTEIN-RELATED 11 173 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fro14g01262 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
396083 Fro13g01336 Fro14g01262
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2563011 Fro Fro13g01336 Fro-Chr13:22906646 Fro14g01262 Fro-Chr14:20210053