AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fro14g01295 ATGGATTCCACCACACAAGAACTAAAGCACCGAACCACCACAGATCAATCTCCAACTCTTCAAGAAGATGACACCACCACCACAAAGACTCAAAAGCCACAACGGACCGCGATCCCGCGTCGCGGGATCCGGTCACTCGCGGTTGGGATCGCGGTCCCGTTGGCTCTAACCCTAGCCAACATATCGATGTTCGGCTGGAACCGTACCTACCGAACCATCCAAAAGCCCTTCTGGATCCCACCCTTATGGGCGTTACATTTAACTTGTCTTTCTTCAGCTTTTGTCATGGGTTTATCGGCCTGGCTCGTGTGGGCCGAGGGCGGCTTTCACCGAAAGCCGGGTGCGGTCGGTTTGTATTTGGGTCAGTTGGGTTTGAGTCTGGCTTGGGATCCGATATTCTTCAAGATGGGTGCGGCAAGGGCGGGTTTGTTGGTGTCTTTGGCTCAGTTGGCGACTACGTTGTCGTGTTCGATGATGTTCGGGCGGGTTAACCGGACCGCGGGTGACTTGGTGAAGCTTTGTTTGGTGTGGTCCGGGTTTTTGACGCTTGTGAACTTGTATTTTGTAGTCTAA 573 53.23 MDSTTQELKHRTTTDQSPTLQEDDTTTTKTQKPQRTAIPRRGIRSLAVGIAVPLALTLANISMFGWNRTYRTIQKPFWIPPLWALHLTCLSSAFVMGLSAWLVWAEGGFHRKPGAVGLYLGQLGLSLAWDPIFFKMGAARAGLLVSLAQLATTLSCSMMFGRVNRTAGDLVKLCLVWSGFLTLVNLYFVV 190
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fro14g01295 190 FunFam translocator protein 2 42 190 - -
Fro14g01295 190 Pfam TspO-MBR family 52 188 IPR004307 GO:0016020(InterPro)
Fro14g01295 190 MobiDBLite consensus disorder prediction 1 36 - -
Fro14g01295 190 PANTHER PERIPHERAL-TYPE BENZODIAZEPINE RECEPTOR 29 188 IPR004307 GO:0016020(InterPro)
Fro14g01295 190 Gene3D TspO-MBR protein 42 190 IPR038330 -
Fro14g01295 190 CDD TSPO-MBR 46 189 IPR004307 GO:0016020(InterPro)
Fro14g01295 190 MobiDBLite consensus disorder prediction 10 35 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fro14g01295 K05770 translocator protein
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Event-related genes

Select Gene_1 Gene_2 Event_name
93181 Fro14g01295 Fro17g00183
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fro Fro-Chr14:20595150 Fro17g00183 Fro-Chr17:1769581 wgd