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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fro14g01302 ATGGCGATCAAGCTTTACGGATCCGCGGGTTCAACCTCGACTCTCCGAGTTAAGGCGTGCCTAGCCGAAAAGGACCTCGACTACGAGTTCGTTAACGTTGATATGAGCAAGAAAGAACACAAGAGTCCTCAGTTTCTTTCACGTAACCCTTTTGGTCAAGTTCCGGCCTTTGAAGATGGTGATCTCAAGCTTTTTGAATCAAGAGCGATTACGCAATATATAGCTCACACATACGCCGACAAGGGGAACGATCTGATAATCAAGGATCCAAAGAAGATGGCTACATTGGCTGTATGGATCGAAGTGGAATCTCAAAAATTCGACCCGGTGGCTTCAAAGTTGACCTGGGAGCTAGCTTACAAGCCGATGTTCGGGATGACAACCGACGACGCAGTGGTGGAAGAGAACGAGAAGAAAATGGAGCAAGTGCTTGACGTGTACGAATCGCGATTGTCAGAGAGCAAGTATTTAGGTGGTGATAGCTTCACATTGGCGGATCTCCACCACGCCCCTGTCGTAATGTACCTGATGGGAACGAAGGCGAAGAGGTTGTTTGACGCGCGACCCCACGTTAGCGTGTGGGCTGCTGACATCCTGTCTAGGCCTGCATGGTTAAAAGTAGCCTCAACTTAA 633 48.97 MAIKLYGSAGSTSTLRVKACLAEKDLDYEFVNVDMSKKEHKSPQFLSRNPFGQVPAFEDGDLKLFESRAITQYIAHTYADKGNDLIIKDPKKMATLAVWIEVESQKFDPVASKLTWELAYKPMFGMTTDDAVVEENEKKMEQVLDVYESRLSESKYLGGDSFTLADLHHAPVVMYLMGTKAKRLFDARPHVSVWAADILSRPAWLKVAST 210
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fro14g01302 210 FunFam Glutathione S-transferase F2 87 208 - -
Fro14g01302 210 SUPERFAMILY GST C-terminal domain-like 84 207 IPR036282 -
Fro14g01302 210 Gene3D Glutaredoxin 1 86 - -
Fro14g01302 210 Pfam Glutathione S-transferase, C-terminal domain 114 202 IPR004046 -
Fro14g01302 210 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 210 IPR010987 -
Fro14g01302 210 FunFam Glutathione S-transferase F2 2 86 - -
Fro14g01302 210 Gene3D - 89 210 - -
Fro14g01302 210 SFLD Glutathione Transferase (cytosolic) 1 208 IPR040079 -
Fro14g01302 210 SFLD Main.5: Phi-like 1 208 - -
Fro14g01302 210 SUPERFAMILY Thioredoxin-like 2 82 IPR036249 -
Fro14g01302 210 PANTHER GLUTATHIONE S-TRANSFERASE RHO 1 208 - GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)|GO:0043295(PANTHER)
Fro14g01302 210 Pfam Glutathione S-transferase, N-terminal domain 1 75 IPR004045 -
Fro14g01302 210 CDD GST-C-Phi 91 208 IPR034347 -
Fro14g01302 210 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Fro14g01302 210 CDD GST-N-Phi 2 76 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fro14g01302 K00799 glutathione S-transferase [EC:2.5.1.18]
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Event-related genes

Select Gene_1 Gene_2 Event_name
92289 Fro12g00656 Fro14g01302
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fro Fro-Chr11:21380459 Fro14g01302 Fro-Chr14:20713990 dispersed
Fro Fro-Chr11:26557042 Fro14g01302 Fro-Chr14:20713990 dispersed
Fro Fro-Chr11:48190557 Fro14g01302 Fro-Chr14:20713990 dispersed
Fro Fro-Chr12:6346825 Fro14g01302 Fro-Chr14:20713990 dispersed
Fro Fro-Chr12:6352133 Fro14g01302 Fro-Chr14:20713990 dispersed
Fro Fro-Chr12:6356769 Fro14g01302 Fro-Chr14:20713990 dispersed
Fro Fro-Chr12:6363387 Fro14g01302 Fro-Chr14:20713990 dispersed
Fro Fro-Chr12:6331536 Fro14g01302 Fro-Chr14:20713990 wgd
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Fro1g00694 . 264 501 Glutathione S-transferase gene family AT5G41240 26.953 5.56e-11 62.0
Fro1g01011 . 2 216 Glutathione S-transferase gene family AT1G78380 67.907 4.99e-115 325.0
Fro2g00804 . 5 219 Glutathione S-transferase gene family AT3G09270 50.917 1.22e-70 213.0
Fro2g00805 . 5 219 Glutathione S-transferase gene family AT3G09270 50.691 1.64e-70 213.0
Fro2g00806 . 5 219 Glutathione S-transferase gene family AT3G09270 52.995 2.54e-72 217.0
Fro2g00807 . 7 221 Glutathione S-transferase gene family AT2G29420 45.161 1.96e-69 210.0
Fro2g00808 . 5 215 Glutathione S-transferase gene family AT3G09270 52.093 2.60e-68 207.0
Fro2g00809 ACH,WGDA 7 219 Glutathione S-transferase gene family AT3G09270 46.977 2.29e-66 202.0
Fro2g00810 . 7 219 Glutathione S-transferase gene family AT2G29420 45.581 4.48e-69 209.0
Fro2g00811 . 7 219 Glutathione S-transferase gene family AT2G29420 46.047 3.45e-69 209.0
Fro2g01519 . 4 217 Glutathione S-transferase gene family AT1G10370 48.372 9.65e-69 209.0
Fro2g01520 . 4 217 Glutathione S-transferase gene family AT1G10370 45.116 1.26e-63 196.0
Fro3g00583 . 93 212 Glutathione S-transferase gene family AT1G75270 38.843 7.87e-15 65.1
Fro3g01294 . 272 414 Glutathione S-transferase gene family AT5G41240 28.966 4.58e-13 66.2
Fro4g00656 . 4 219 Glutathione S-transferase gene family AT1G17180 63.594 3.48e-106 303.0
Fro4g00657 . 3 219 Glutathione S-transferase gene family AT1G17180 58.716 9.16e-98 282.0
Fro5g00281 . 39 132 Glutathione S-transferase gene family AT5G16710 33.981 1.61e-06 47.0
Fro5g00405 WGDA 17 161 Glutathione S-transferase gene family AT2G02390 53.103 1.61e-49 157.0
Fro6g00537 WGDA 2 230 Glutathione S-transferase gene family AT5G41210 63.755 1.79e-108 311.0
Fro6g01045 . 4 209 Glutathione S-transferase gene family AT1G78380 64.734 4.43e-99 285.0
Fro7g00770 . 4 214 Glutathione S-transferase gene family AT1G78380 57.075 1.38e-87 256.0
Fro8g00154 . 3 224 Glutathione S-transferase gene family AT1G10370 34.978 3.05e-46 152.0
Fro8g00155 . 3 217 Glutathione S-transferase gene family AT1G10370 38.426 2.20e-46 152.0
Fro8g00156 . 3 197 Glutathione S-transferase gene family AT1G10370 39.286 3.40e-48 156.0
Fro8g00157 . 5 198 Glutathione S-transferase gene family AT1G10370 40.513 3.22e-48 156.0
Fro8g00158 . 5 219 Glutathione S-transferase gene family AT1G10370 37.5 1.04e-52 168.0
Fro8g00159 . 1 226 Glutathione S-transferase gene family AT1G59700 40.529 1.61e-50 163.0
Fro8g00160 . 5 219 Glutathione S-transferase gene family AT1G10370 38.426 7.67e-53 169.0
Fro8g00163 . 3 217 Glutathione S-transferase gene family AT1G10370 48.148 4.65e-71 215.0
Fro8g01617 . 3 219 Glutathione S-transferase gene family AT1G17180 53.636 6.72e-76 226.0
Fro9g00319 . 31 217 Glutathione S-transferase gene family AT2G02390 52.406 1.04e-66 202.0
Fro9g00700 . 1 219 Glutathione S-transferase gene family AT2G02390 67.568 2.01e-106 304.0
Fro11g01449 . 5 222 Glutathione S-transferase gene family AT1G10370 43.379 8.49e-61 189.0
Fro11g02248 . 1 204 Glutathione S-transferase gene family AT2G30860 70.098 2.19e-109 311.0
Fro11g02280 . 8 221 Glutathione S-transferase gene family AT2G29420 45.37 2.43e-56 177.0
Fro11g02281 . 5 212 Glutathione S-transferase gene family AT3G09270 41.827 4.43e-52 166.0
Fro11g02493 . 7 207 Glutathione S-transferase gene family AT2G29420 46.535 3.06e-65 199.0
Fro11g02569 . 1 204 Glutathione S-transferase gene family AT2G30860 70.098 2.19e-109 311.0
Fro11g03454 . 3 213 Glutathione S-transferase gene family AT3G03190 47.642 2.24e-70 212.0
Fro12g00324 . 6 221 Glutathione S-transferase gene family AT2G29490 45.622 2.06e-53 169.0
Fro12g00656 ACH 3 212 Glutathione S-transferase gene family AT2G02930 56.398 4.45e-83 244.0
Fro12g00657 . 54 257 Glutathione S-transferase gene family AT2G47730 56.373 1.65e-78 234.0
Fro12g00658 . 3 207 Glutathione S-transferase gene family AT1G02930 51.208 5.94e-68 206.0
Fro12g00659 . 4 211 Glutathione S-transferase gene family AT4G02520 54.808 7.20e-73 218.0
Fro12g00660 . 1 209 Glutathione S-transferase gene family AT3G62760 47.867 3.44e-62 191.0
Fro12g00952 . 5 221 Glutathione S-transferase gene family AT3G09270 47.111 1.83e-64 197.0
Fro12g00953 ACH,WGDA 7 218 Glutathione S-transferase gene family AT2G29420 46.479 7.16e-64 196.0
Fro12g01760 . 8 218 Glutathione S-transferase gene family AT2G02390 57.82 1.74e-81 240.0
Fro12g01761 . 2 215 Glutathione S-transferase gene family AT2G02390 47.196 1.70e-67 205.0
Fro14g00421 . 5 227 Glutathione S-transferase gene family AT1G10370 38.839 5.83e-50 161.0
Fro14g00682 . 7 223 Glutathione S-transferase gene family AT3G09270 46.083 1.48e-63 195.0
Fro14g00683 . 9 110 Glutathione S-transferase gene family AT2G29420 58.252 1.29e-39 129.0
Fro14g01302 ACH 3 208 Glutathione S-transferase gene family AT1G02920 61.165 2.92e-92 267.0
Fro15g01192 WGDA 5 211 Glutathione S-transferase gene family AT2G02390 53.623 6.95e-75 224.0
Fro15g01235 . 1 258 Glutathione S-transferase gene family AT5G16710 64.045 2.45e-126 358.0
Fro15g02084 . 9 235 Glutathione S-transferase gene family AT5G02790 67.401 1.14e-110 318.0
Fro15g02297 . 246 405 Glutathione S-transferase gene family AT5G41240 27.326 3.88e-09 56.2
Fro16g01311 . 264 395 Glutathione S-transferase gene family AT5G41240 26.515 1.04e-10 62.0
Fro16g01720 . 2 228 Glutathione S-transferase gene family AT5G41210 62.115 2.21e-107 308.0
Fro16g01721 WGDA 2 230 Glutathione S-transferase gene family AT5G41210 65.502 3.33e-114 325.0
Fro16g01841 WGDA 2 230 Glutathione S-transferase gene family AT5G41210 57.642 2.73e-99 287.0
Fro16g01842 . 2 245 Glutathione S-transferase gene family AT5G41210 63.673 2.08e-114 326.0
Fro16g01843 . 2 245 Glutathione S-transferase gene family AT5G41210 61.789 1.09e-108 311.0
Fro16g01844 . 2 228 Glutathione S-transferase gene family AT5G41210 62.115 2.92e-107 307.0
Fro16g02278 . 9 235 Glutathione S-transferase gene family AT5G02790 67.841 1.67e-112 320.0
Fro17g00997 . 1 266 Glutathione S-transferase gene family AT1G77290 65.543 1.16e-135 381.0
Fro18g01231 . 1 212 Glutathione S-transferase gene family AT1G75270 72.3 1.33e-113 321.0
Fro10000174.1g00004 . 268 395 Glutathione S-transferase gene family AT5G41240 26.357 1.28e-06 47.8