AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fro14g01356 ATGCTCAACATCTTCAACAAAAACCTCCGGCGACTCTGCTCAAAGCTCCGGTGGCCGGTGCGCCGCCGTGCAAAACCTAAAGTCATCATCAAAAGATTCGGAAGATCAAATTCAAGAAATCAAGATTCTGTAAACACAAATGGGTCAGCCACAATTCACCCAAATAACCATTTGGGTGTTCAAAAATCAGAAAACCCAATTCGAATTGCAACATTTAATGCTGCTTTATTCTCCATGGCACCAGCAGTTCCAGAGTTGACCCGAAAAGCTTCAAGCTTTGACCATGGCGATGACGATGAAGATCACACAAAGGTAGACTCCAATTCCTCTGTTTCTTACCGTACTTCAAGATCAAAATCAATGGTTGATCGGCCCAAAAGTATATTGAAACAATCACCATTACATTCAAGCTCCATGAGTAGTTCAGAAGCTTTATCAAAACAGCAGAAATTTGCAAAGTCAAAGCTAAGAGTATCGATAAACTTACCTGATAATGAGATCTCATTGAAAAGAAGTGGGCAATTAAGCTTTGTTCCAGACGAAAAAGAACCCGACCCGAGTTCAAGAACAAGTAGTTCTAAGGGAATTAGCAAGATTTTGAAAGGAAAAGGTGTTTTGAGATCACAAAACAGTGTTTCTTTAAGAGAAGTTGAAAGTCAAAGGGGGACATATAGGTCAACGAAGACTGTTCTTGAGGTTTTGAAAGAATTGAATGCAGATATATTGGCTTTACAAGATGTGAAAGCTGAAGAAGAGAAAGACATGAAACCATTGTCTGATCTTGCTGCTGCTTTGGGTATGAATTATGTGTTTGCTGAGAGTTGGGCACCGGAATATGGTAACGCAGTGTTGTCGAAGTGGCCGATCAAACGATCGAAGGTTCAGAAAATTTTTGATGATTCTGACTTCAGGAATGTTTTAAAGGCTACAATTGATGTTCCACAAACCGGAGAAGTTGATTTTCATTGTACCCTTCTTGATCATCTTGATGAAAATTGGCGAATGAAGCAAATAAAAGCAATCATCGAATCTAATGAGAGACCACACATCTTAGCCGGAGGTATAAACTCCCTTGATGAAACAGACTACTCGCCCGAAAGATGGACAGACATTGTTAAGTACTATGAAGAAATGGGAAAACCGACACCAAAAGTTGAAGTGATGAAGTACTTAAAGAGCAAACAGTACACTGACGCTAAGGATTTTGTAGGCGAATGTGAATCTGTAGTCATTATCGCTAAAGGCCAAAATGTGCAGGGTACATGCAAATACGGTACTAGGGTAGATTACATATTGGTGTCGCCTGATTCACCCTACAAGTTTGTTCCTGGTTCATATATGGTTTTATCGTCAAAAGGTACTTCTGACCATCACATAGTCAAAGTTGATGTAAGAAAGGTAGAAGAATCAGGCCAACAACAGTACGTTAGAAGACATCGACATCCTAAACAAAAAGTTGTGAAGATAACACATTCTAATTCATCAAAAGGGGCATGGAAAATGCAAACTTTAGATAGATAG 1521 39.45 MLNIFNKNLRRLCSKLRWPVRRRAKPKVIIKRFGRSNSRNQDSVNTNGSATIHPNNHLGVQKSENPIRIATFNAALFSMAPAVPELTRKASSFDHGDDDEDHTKVDSNSSVSYRTSRSKSMVDRPKSILKQSPLHSSSMSSSEALSKQQKFAKSKLRVSINLPDNEISLKRSGQLSFVPDEKEPDPSSRTSSSKGISKILKGKGVLRSQNSVSLREVESQRGTYRSTKTVLEVLKELNADILALQDVKAEEEKDMKPLSDLAAALGMNYVFAESWAPEYGNAVLSKWPIKRSKVQKIFDDSDFRNVLKATIDVPQTGEVDFHCTLLDHLDENWRMKQIKAIIESNERPHILAGGINSLDETDYSPERWTDIVKYYEEMGKPTPKVEVMKYLKSKQYTDAKDFVGECESVVIIAKGQNVQGTCKYGTRVDYILVSPDSPYKFVPGSYMVLSSKGTSDHHIVKVDVRKVEESGQQQYVRRHRHPKQKVVKITHSNSSKGAWKMQTLDR 506
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fro14g01356 506 MobiDBLite consensus disorder prediction 171 196 - -
Fro14g01356 506 MobiDBLite consensus disorder prediction 90 148 - -
Fro14g01356 506 Coils Coil 234 254 - -
Fro14g01356 506 SUPERFAMILY DNase I-like 228 464 IPR036691 -
Fro14g01356 506 MobiDBLite consensus disorder prediction 36 59 - -
Fro14g01356 506 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 15 463 IPR051916 GO:0005783(PANTHER)|GO:0006506(PANTHER)
Fro14g01356 506 MobiDBLite consensus disorder prediction 90 107 - -
Fro14g01356 506 FunFam Endonuclease-exonuclease-phosphatase family protein 215 467 - -
Fro14g01356 506 Pfam Endonuclease-Exonuclease-phosphatase family 222 457 IPR005135 GO:0003824(InterPro)
Fro14g01356 506 Gene3D Endonuclease-exonuclease-phosphatase 210 467 IPR036691 -
Fro14g01356 506 MobiDBLite consensus disorder prediction 130 148 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fro14g01356 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
396103 Fro13g01382 Fro14g01356
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fro Fro-Chr9:28490442 Fro14g01356 Fro-Chr14:21486122 transposed
Fro Fro-Chr13:23249405 Fro14g01356 Fro-Chr14:21486122 wgd