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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fro14g01362 ATGGATGCTTCAAGAACATCGTCTATTTGCTTCGGTATGGAATCTATAGGGCTTGAAACCGACATCCCAGGCTCAAAAACATATAGTAATCTAGGACTCAAACAAACATATAAGCACAATCATGGAAACCCGAAAGTTTTATCACTTCTTTCTTCACTGCTTGAAAGATCTGTCCAAATGAACGAGACTTTACTCGAGAAAACACAGACTAAAGATGTTATTACGGTTTTTCATGGTTCAAGACCACCGACACTTAGCATTAAGGAGTACGTTGATAGAATATTCAAGTACTCGCATTGCAGCCCCTCGTGTTTTGTTGTTGCACAGGTTTACATGGACCGATTTATTCAGTGTAGAAATGTTAATTTGACTTCTCTTAGTGTCCATCGACTTCTCATCACTAGTATAATGCTTGCTGCCAAGTTCATTGACGACGCGTTCTTCAATAATGCGTATTATGCAAAAGTGGGAGGAGTAACAACCGCCGAATTAAACAGGCTGGAGATGAAATTCCTCTTTGGTCTGGACTTTCGGCTCCATGTCAGCCTTCGTACGTTTGGTAGATATTGTTCCCAGTTGGAAAAACAAGATTCATGTGAGCTCCAAATGGAAAGACCGCCACGCGTGATTCACGCCCCCTGTGGACTCAAAGAAACCTGGTCTGGAAGTGATGACTCGAGTCCTTATGGCACAACAGAGATACATATCGTATAG 714 41.88 MDASRTSSICFGMESIGLETDIPGSKTYSNLGLKQTYKHNHGNPKVLSLLSSLLERSVQMNETLLEKTQTKDVITVFHGSRPPTLSIKEYVDRIFKYSHCSPSCFVVAQVYMDRFIQCRNVNLTSLSVHRLLITSIMLAAKFIDDAFFNNAYYAKVGGVTTAELNRLEMKFLFGLDFRLHVSLRTFGRYCSQLEKQDSCELQMERPPRVIHAPCGLKETWSGSDDSSPYGTTEIHIV 237
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fro14g01362 237 Gene3D - 33 211 - -
Fro14g01362 237 PANTHER UNCHARACTERIZED 36 206 IPR013922 GO:0000079(InterPro)|GO:0019901(InterPro)
Fro14g01362 237 SUPERFAMILY Cyclin-like 93 180 IPR036915 -
Fro14g01362 237 Pfam Cyclin 61 179 IPR013922 GO:0000079(InterPro)|GO:0019901(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fro14g01362 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
93195 Fro14g01362 Fro17g00245
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fro Fro-Chr10:15683670 Fro14g01362 Fro-Chr14:21605265 dispersed
Fro Fro-Chr14:7098206 Fro14g01362 Fro-Chr14:21605265 dispersed
Fro Fro-Chr14:21605265 Fro2g00294 Fro-Chr2:3062950 dispersed
Fro Fro-Chr11:12798082 Fro14g01362 Fro-Chr14:21605265 transposed
Fro Fro-Chr14:21605265 Fro17g00245 Fro-Chr17:2484812 wgd