AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fro14g01365 ATGGCGGAATCCAACCGCACCACCGTCCTCGTCACCGGCGCCGGTGGCAGAACTGGGCAAATTGTATATAAGAAGCTGAAGGAGAGATCAGGGGAGTATGTTGCACGAGGTCTGGTTCGAACGGAGGAGAGTAAGGAGAAGATCGGTGGAGAAGACGACGTTTTGATCGGAGATATAAGGAATATAGAAACTGTTGTTCCTGCTGTTGAAGGTATTGATGCTCTTGTGATTCTCACCAGTGCTGTTCCTAAGATGAAACCGGGGTTTGATCCGACTAAAGGTGGAAGGCCCGAGTTCTATTTTGAAGAGGGATCATATCCTGAACAGGTTGATTGGGAAGGGCAGAAGAATCAAATTGATGCAGCTAAAGCTGCTGGAGTGAAGCAAATTGTTCTGGTTGGCTCCATGGGTGGAACCAACATTAACCACCCTTTAAACAGCCTGGGAAACGGGAACATACTGGTCTGGAAGAGAAAGGCTGAACAGTATCTAGCAGACTCTGGGATCCCATACACTATTATAAGGGCTGGAGGTTTGCAAGACAAGGAAGGCGGTGTACGAGAACTGCTTGTCGGAAAAGATGACGAGCTTCTTCAGACTGATACCAAAACCGTTGCGAGAGCAGATGTGGCTGAAGTCTGTATTCAGGCGTTGAAATTTGACGAGGCGAAGTTCAAAGCATTTGATCTTGCATCCAAACCCGAGGGAACTGGAATGCCAACAAAAGACTTCAAGAGCTTATTTGCGCAGGTCACTGCTCGGTTTTAA 768 47.66 MAESNRTTVLVTGAGGRTGQIVYKKLKERSGEYVARGLVRTEESKEKIGGEDDVLIGDIRNIETVVPAVEGIDALVILTSAVPKMKPGFDPTKGGRPEFYFEEGSYPEQVDWEGQKNQIDAAKAAGVKQIVLVGSMGGTNINHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGGVRELLVGKDDELLQTDTKTVARADVAEVCIQALKFDEAKFKAFDLASKPEGTGMPTKDFKSLFAQVTARF 255
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fro14g01365 255 CDD SDR-a5 8 230 - -
Fro14g01365 255 Pfam NAD(P)H-binding 13 219 IPR016040 -
Fro14g01365 255 FunFam Uncharacterized protein At5g02240 5 255 - -
Fro14g01365 255 PANTHER NITROGEN METABOLIC REGULATION PROTEIN NMR-RELATED 2 255 IPR044163 GO:0009507(PANTHER)|GO:0016491(InterPro)
Fro14g01365 255 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 249 IPR036291 -
Fro14g01365 255 Gene3D - 4 255 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fro14g01365 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fro Fro-Chr12:32864256 Fro14g01365 Fro-Chr14:21663266 dispersed
Fro Fro-Chr14:6213857 Fro14g01365 Fro-Chr14:21663266 dispersed