AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fro14g01370 ATGGATTCTATCATCTCACCTTCACCTTCACCTTCACCTTCCACCGCCAAACGCCTGAAACCTCCGGCCACCATGGACGCTATTCTCGCCTCCTTCTTATCTCTCTCCGACTCTCCGGCGATCACCACCTCCTTCGACCGCCTTGTTCAGTCCACCGCCTCCGATCACGATCAGAACTGCTTGATTCAGCGCGCGATGCGCCTCGGAGCGCTGTTGGTTGAAGCTGGAAACAGATCTGCGAGGAGGTGCTCGTGTGATCATAACGCGGTTGTGTGGCCTCTCTCGCCGGACCTTACTGTTAAGATTTTTTCGATGCTTGATACGCAGAGTGTGTGTTATGTTGCGGCTACATGTTCGTTTTTTCAGAAGTGTGCAATGGATCCTCTGTGTTTTGCTAACATTGACTTGGCTACATTAGTCCCTAAAGTCAACAATGCTGTGGTGTCGACTATGATCCATCGAGCTGGAGATGCACTTAAGTCTATAAGGCTTGGTGTATTGCCAGCCATTCCCGCTCCACCTTTCTTTTCGTCTCAACCATTAGTTTATAGCATTAGAAATGCAAACGATGCATCAGGAATTTCATGGAATGACAAGAGATCTAGGCAAGGAAAGGAATCTTCCATTCTAACAAGGTCCTGTCTGAGTTCTTTGAGTGGCAATGGTGGTGCACCTGGATATGGGGTACATTTGAGAAGATTACACCTTTACAACATTGAAAGAATGGACAATGCGTCCCTCTTGACATCATTATCAGCTTGCCCATTTCTCCTTGATCTAGAAATTGTGGGCCTGCATGTTGAATTGAGGCATACATTGGAGTCGATAAGTAGAAATTGTCCCTTAATAGAACGTTTGGTTTTTGAATCTTCAAAAACAGGTAGAGATGATGGTTTGAAATTCCCAACCTGCAATGAATTTGTCCTCAACTGTCCTAACATAACAACTTTAGCACTAAAAGGATTTAAGCTACATGACTACAAGGCTCGTATGCTGGCAAAGGGATTACGAAGATTGAAGCACCTTGATCTTTCAACATCTTACTCATTCACTGGTGCCTTTTTAAAGAATGTTAGTGGCAATGGTGGTAGAGATAATTTGGAGGTGATGATTTTAAGAGACTGCATGCATCTAAAGGAAGTTGAAGTTGAACGGTTTATGGCAGCTGTTCTTGCAGGGGAATTTAAGCTCCTTAGACATCTTGATATATCTAACAGGGAAGGTCTAGCATGTGAGGGTGACTGGAGCAATAGATGTTACAATGCTAGTTTTATTCCTATACAGCAATTATTGGAACTGAGGCCTAATTTTTGTCTTGTAGCTGAATTCCCAAAAGGGAGTTACATTGACACTGATCAAATGATGGGCAGTGATGTAAGTTTACCATCACAGTCGAGCAGTAGCCAAACGTCTGATGGGTCGAGCACATCGGACGGGAGTTATAATAGTGATCATGGTAGTGGTAACGAGTACGGTAGAGAAAGTGGTTCTACGATTTACGAAGAAAATTCGGACTACCTCCCAGAGTTGTTGATTAATAAGCATTAA 1548 43.8 MDSIISPSPSPSPSTAKRLKPPATMDAILASFLSLSDSPAITTSFDRLVQSTASDHDQNCLIQRAMRLGALLVEAGNRSARRCSCDHNAVVWPLSPDLTVKIFSMLDTQSVCYVAATCSFFQKCAMDPLCFANIDLATLVPKVNNAVVSTMIHRAGDALKSIRLGVLPAIPAPPFFSSQPLVYSIRNANDASGISWNDKRSRQGKESSILTRSCLSSLSGNGGAPGYGVHLRRLHLYNIERMDNASLLTSLSACPFLLDLEIVGLHVELRHTLESISRNCPLIERLVFESSKTGRDDGLKFPTCNEFVLNCPNITTLALKGFKLHDYKARMLAKGLRRLKHLDLSTSYSFTGAFLKNVSGNGGRDNLEVMILRDCMHLKEVEVERFMAAVLAGEFKLLRHLDISNREGLACEGDWSNRCYNASFIPIQQLLELRPNFCLVAEFPKGSYIDTDQMMGSDVSLPSQSSSSQTSDGSSTSDGSYNSDHGSGNEYGRESGSTIYEENSDYLPELLINKH 515
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fro14g01370 515 MobiDBLite consensus disorder prediction 454 502 - -
Fro14g01370 515 SUPERFAMILY F-box domain 85 136 IPR036047 GO:0005515(InterPro)
Fro14g01370 515 Gene3D Ribonuclease Inhibitor 90 297 IPR032675 -
Fro14g01370 515 Gene3D Ribonuclease Inhibitor 298 419 IPR032675 -
Fro14g01370 515 PANTHER F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED 94 390 - -
Fro14g01370 515 SUPERFAMILY RNI-like 229 405 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fro14g01370 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
93199 Fro14g01370 Fro18g00155
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fro Fro-Chr14:21685867 Fro18g00155 Fro-Chr18:2210808 wgd