Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fro14g01375 | ATGCCGACCAACTTCGAACGGAATCTCAACCTCTGCTTCACCAAACTCAAACGCCACCACTCCCCACCACCACCACCACCACCACCACCACCACCGCCACCATCTCACCACCGCCACCGCCGCCACCACTCCGAAACCACCCTCATCAAAAACTTCAACACCCTCTACAACCTCCCTCCCGCCTCCGCCTCCGACTCCGACGACGGCTCCGCCACCACCACCGCCGCCGCCGACTTCTCCACCGTCGTGGCCTCCGACCGCTTCTTCTTCTCCTCCCCCGGCCGCTCCAACTCCATCGTCGACTCCTCCGCCTCCTCCTCCTCCGTCGCCTCCACCTCCTTCACCGGCGCCGGCGACGGCGGCGGCGTCGCCATCCCGACGATTTCGCCGGACCCGTACTTTGACTTCAGAAGATCGATGCAGGAGATGGTGGAGGCACGTGACCTCATCGATGTTCGTGCCGATTGGGATTATTTGCACGAGCTTCTCACGTGCTATCTGGATTTGAACCCCAAGAGTGCTCATAAGTTTATCGTCGGAGCTTTTGCTGATCTTCTGGTCACTCTCATGGCGGAAGGCGGTGGTGGTCGCCGGAGAAGTTGA | 603 | 61.19 | MPTNFERNLNLCFTKLKRHHSPPPPPPPPPPPPPSHHRHRRHHSETTLIKNFNTLYNLPPASASDSDDGSATTTAAADFSTVVASDRFFFSSPGRSNSIVDSSASSSSVASTSFTGAGDGGGVAIPTISPDPYFDFRRSMQEMVEARDLIDVRADWDYLHELLTCYLDLNPKSAHKFIVGAFADLLVTLMAEGGGGRRRS | 200 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fro14g01375 | 200 | Pfam | Transcriptional repressor, ovate | 129 | 189 | IPR006458 | - | |
| Fro14g01375 | 200 | MobiDBLite | consensus disorder prediction | 16 | 43 | - | - | |
| Fro14g01375 | 200 | MobiDBLite | consensus disorder prediction | 19 | 33 | - | - | |
| Fro14g01375 | 200 | NCBIfam | uncharacterized plant-specific domain TIGR01568 | 126 | 190 | IPR006458 | - | |
| Fro14g01375 | 200 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 24 | 34 | - | - | |
| Fro14g01375 | 200 | PANTHER | TRANSCRIPTION REPRESSOR OFP7-RELATED | 36 | 190 | IPR038933 | GO:0045892(InterPro) | |
| Fro14g01375 | 200 | ProSiteProfiles | OVATE domain profile. | 125 | 188 | IPR006458 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fro14g01375 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fro | Fro-Chr14:21728613 | Fro5g00994 | Fro-Chr5:16499217 | dispersed | |
| Fro | Fro-Chr14:21728613 | Fro15g01962 | Fro-Chr15:34080735 | transposed |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Fro | Ovate | 1.4e-24 | No_clan | TF | OFP |