AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fro14g01421 ATGGCTGCCACAAATGAATTCATGCATCATTTATCTATGGCTGCTTCTGAATGGTTCTTGATGTTTCTGATGTACATTGATGCTGCATTGGGCTTTATCCTCACAAGATTTGCTCATCAATGTGAATTGCAAACCCCTTGCTTGTTTTGCTTCCGGTTTGATCATGTTTTTGGCGATAAACCTGATTATTATTTGAGTCACTTCTGCAATAATCATCGCGCTGAGGTTTCTTCTTTGGTATCTTGTAACCTTCATCATAAGCTCTCTGATGTAAGAGAAATGTGTGATGATTGTTTCATGTCAACGATGAAGCAAAATCAAGGGTACCCGAAACCGTTATTGAATAAGAATCTTGTTCGTGCACCTTCAAGTACAGGGTCTTGTTCGTGTTGTAAGAGACAGTGGAAACCAAAACCAAGAAGTAAGATCAAATTAGGGGTTCCCAAAGTAACTAGGCAACCTCCATTGCCACTAATTGCAGGTCGGGCCTGTGGTCGTTATCGCCGCCGGAATTATTTCAAAAAGGCACGGGATAAGATTTCAGGAACCACGACTCCTTGCCACGTTGGAAATAATATCCATGTAGATGTTGACATGGACGCGCTATCTGATTCTGGTTGTGCTGACCTTAAGTTCAATTCGTGTTCAGATGCTGAATCTGGAGATTCGTTTTATGAGATTGAATGTGAAAATGAGGGCTTTGAAGATGATTCTTGTGTTATTATACGTCAAGTAGAACATTTCAAGAGTTTCTCTAATCTTGAGCCTTCAGTATTGAACGGTACCCATAACGAGAGTGTAGTGAGTCCTCTGTCTTTTACATCCAATGGTTCAATGGAGCATGCTGTAAAAGAGAATGGGTCTCTAAAAGTTAGTAATGAAACAGGTTCATTTAATCAAGATGTGCATTCCCCTAATGATCATGAAGGCTATGAATCTCCGAGCACACACAGTGTAGGTGAAATCAAGGGTGAAAGTGACATGGAAAAGCTAAAATGGCAGATTGAATATGATCGAAAACAACTTCGTTTATTACACAAGGAATTAGAGGAAGAAAGAAGCGCGGCTGCTATAGCTGCTGAGGGGTCTAGTTCTCCAGACAAACATGAAGGGTTTGATTCTCCAAGCACACACAGTGTGGGTGATATCAAGGGTGAAACAGAAATGGAAAAGCTAAAACGACAGATGGAGTATGATCATGAACAACTACGTCTATTGCACAAGGAGTTAGAGGAAGAAAGAAACGCTGCTTCAATAGCTGCTGACGAGGCAATGGCCATGATTACAAGGTTGCAAGAAGAAAAATCCGCTTTACATATGGAAGCATTGCAGTATTTAAGAATGATGGATGAACAAGCAGAATATGATATGGAAGCTTTAGACAAGGCTAATGATCTTGTTACTGAGAAAGATAAAGAAATTCAAGATTTAGAAGCCGAGCTAGAATTTTTCAGAAGCCGATACGAGGATGAATCAATCAATGGGAATGCTACTGTTAATTTCAAAGAAAATCATATGGGAAATGGGAAAATTGATTCTATATCTTCTGGCTTAAAATCTGTGAATACAGTAGAATCGAGGGCTAATATTCATGCGCTTTTAGACCTTGAAGATGAAAAGCAATACATTTTAAACTCTATATCAGAGTTAGAAACGAAATCTCACCAATTTTCTGATGGTAATAATGGTTTGTCACAACAAAATGAAACTCATACAGGTACCATTGGGAATGAAATTTCAGATCTTAATGAATGGTTAGAAGCAGTTGAATCTGATCTTGATTTTCTTGAGCATGCTTGTAACACGGTCCAGAGTCACGTGGGAGTAGAGTTTATTCAAAAACTAGCTCAGCACTTGCATGATTTGAGGAGGGTTAGGTTTGATAGAAGATGTAAAACTGTTGGTTGA 1908 39.05 MAATNEFMHHLSMAASEWFLMFLMYIDAALGFILTRFAHQCELQTPCLFCFRFDHVFGDKPDYYLSHFCNNHRAEVSSLVSCNLHHKLSDVREMCDDCFMSTMKQNQGYPKPLLNKNLVRAPSSTGSCSCCKRQWKPKPRSKIKLGVPKVTRQPPLPLIAGRACGRYRRRNYFKKARDKISGTTTPCHVGNNIHVDVDMDALSDSGCADLKFNSCSDAESGDSFYEIECENEGFEDDSCVIIRQVEHFKSFSNLEPSVLNGTHNESVVSPLSFTSNGSMEHAVKENGSLKVSNETGSFNQDVHSPNDHEGYESPSTHSVGEIKGESDMEKLKWQIEYDRKQLRLLHKELEEERSAAAIAAEGSSSPDKHEGFDSPSTHSVGDIKGETEMEKLKRQMEYDHEQLRLLHKELEEERNAASIAADEAMAMITRLQEEKSALHMEALQYLRMMDEQAEYDMEALDKANDLVTEKDKEIQDLEAELEFFRSRYEDESINGNATVNFKENHMGNGKIDSISSGLKSVNTVESRANIHALLDLEDEKQYILNSISELETKSHQFSDGNNGLSQQNETHTGTIGNEISDLNEWLEAVESDLDFLEHACNTVQSHVGVEFIQKLAQHLHDLRRVRFDRRCKTVG 635
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fro14g01421 635 Coils Coil 393 441 - -
Fro14g01421 635 Coils Coil 460 494 - -
Fro14g01421 635 ProSiteProfiles GTD-binding domain profile. 387 485 IPR007656 -
Fro14g01421 635 Pfam Zein-binding 391 481 IPR007656 -
Fro14g01421 635 MobiDBLite consensus disorder prediction 355 382 - -
Fro14g01421 635 MobiDBLite consensus disorder prediction 293 321 - -
Fro14g01421 635 PANTHER MYOSIN-BINDING PROTEIN 2 293 360 IPR039306 GO:0017022(InterPro)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fro14g01421 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
93216 Fro14g01421 Fro18g00187
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fro Fro-Chr12:5563809 Fro14g01421 Fro-Chr14:22536805 dispersed
Fro Fro-Chr14:22536805 Fro2g00268 Fro-Chr2:2881057 dispersed
Fro Fro-Chr14:22536805 Fro18g00187 Fro-Chr18:2624636 wgd