AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fro18g01561 | ATGTCCAACGAAAAGGAAAGAGAAACTCATGTTTACATGGCGAAGCTCGCTGAACAAGCCGAGCGTTACGAAGAGATGGTTGAAAGTATGAAGAGCATTGCAAAGCTAAATGTTGAACTAACTGTTGAAGAGCGAAACCTGCTTTCAGTTGGATACAAGAATGTGATTGGTGCAAGGAGGGCATCTTGGCGTATTATGTCCTCAATTGAGCAAAAGGAGGAATCAAAAGGAAATGAAAGCAATGTTACCTTAATTAAGGGCTATTGCCGAAAGGTTGAAGACGAGCTTGCCAAAATTTGCAGTGACATTCTTGAGATTATAGATAAGCATCTCATACCCTCTTCTGGCTCAGGGGAAGCTACAGTTTTTTACCACAAGATGAAAGGTGACTACTATCGGTACCTTGCTGAATTCAAGACAGACCAAGAAAGGAAGGATGCTGCCGAACAATCATTGAAGGGCTATGAGGCTGCTGCTGCTGCTGCAAACACGGAGCTCCCTTCAACCCACCCAATTCGTCTTGGTTTGGCTCTCAATTTCTCAGTGTTTTACTATGAAATTATGAACTCGCCCGAGAGGGCCTGTCATTTGGCTAAACAAGCTTTTGATGAGGCAATTGCTGACCTGGACTCCTTAAGTGAAGAATCTTACAAGGACAGCACCTTAATCATGCAACTGTTGAGAGACAACCTCACTCTTTGGACCTCTGATTTGCCTGAGGATGGAGGTGATGAAAACCATCCCAAGGGTGAAGAATCCAAACCAGCCGAACCAGAGGAGAAGAAGCAGTGA | 792 | 44.32 | MSNEKERETHVYMAKLAEQAERYEEMVESMKSIAKLNVELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNESNVTLIKGYCRKVEDELAKICSDILEIIDKHLIPSSGSGEATVFYHKMKGDYYRYLAEFKTDQERKDAAEQSLKGYEAAAAAANTELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIADLDSLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGDENHPKGEESKPAEPEEKKQ | 263 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fro18g01561 | 263 | PIRSF | 14-3-3 | 1 | 247 | IPR000308 | - | |
| Fro18g01561 | 263 | PANTHER | 14-3-3 PROTEIN | 6 | 240 | IPR000308 | GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER) | |
| Fro18g01561 | 263 | Pfam | 14-3-3 protein | 13 | 235 | IPR023410 | - | |
| Fro18g01561 | 263 | MobiDBLite | consensus disorder prediction | 240 | 263 | - | - | |
| Fro18g01561 | 263 | ProSitePatterns | 14-3-3 proteins signature 2. | 217 | 236 | IPR023409 | - | |
| Fro18g01561 | 263 | Gene3D | - | 1 | 247 | IPR036815 | - | |
| Fro18g01561 | 263 | ProSitePatterns | 14-3-3 proteins signature 1. | 45 | 55 | IPR023409 | - | |
| Fro18g01561 | 263 | SMART | 1433-4 | 7 | 248 | IPR023410 | - | |
| Fro18g01561 | 263 | Coils | Coil | 145 | 165 | - | - | |
| Fro18g01561 | 263 | FunFam | 14-3-3 protein epsilon | 1 | 248 | - | - | |
| Fro18g01561 | 263 | SUPERFAMILY | 14-3-3 protein | 6 | 237 | IPR036815 | - | |
| Fro18g01561 | 263 | PRINTS | 14-3-3 protein zeta signature | 88 | 112 | IPR000308 | - | |
| Fro18g01561 | 263 | PRINTS | 14-3-3 protein zeta signature | 154 | 180 | IPR000308 | - | |
| Fro18g01561 | 263 | PRINTS | 14-3-3 protein zeta signature | 39 | 68 | IPR000308 | - | |
| Fro18g01561 | 263 | PRINTS | 14-3-3 protein zeta signature | 208 | 237 | IPR000308 | - | |
| Fro18g01561 | 263 | PRINTS | 14-3-3 protein zeta signature | 181 | 207 | IPR000308 | - | |
| Fro18g01561 | 263 | PRINTS | 14-3-3 protein zeta signature | 119 | 141 | IPR000308 | - | |
| Fro18g01561 | 263 | Coils | Coil | 13 | 33 | - | - | |
| Fro18g01561 | 263 | MobiDBLite | consensus disorder prediction | 236 | 263 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fro18g01561 | K06630 | 14-3-3 protein epsilon |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 397165 | Fro18g01561 | Fro3g00196 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fro | Fro-Chr18:22511072 | Fro7g00743 | Fro-Chr7:8672497 | dispersed | |
| Fro | Fro-Chr10:19851794 | Fro18g01561 | Fro-Chr18:22511072 | transposed | |
| Fro | Fro-Chr18:22511072 | Fro3g00196 | Fro-Chr3:2065798 | wgd |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Fro1g00465 | WGDA | 2 | 253 | 14-3-3 family | AT1G78300 | 86.561 | 4.39e-161 | 445.0 | |
| Fro1g00834 | ACH,WGDA | 3 | 254 | 14-3-3 family | AT3G02520 | 88.492 | 4.03e-165 | 456.0 | |
| Fro2g00437 | WGDA | 6 | 263 | 14-3-3 family | AT2G42590 | 76.448 | 3.76e-144 | 403.0 | |
| Fro2g01408 | . | 1 | 244 | 14-3-3 family | AT2G42590 | 81.557 | 1.57e-150 | 419.0 | |
| Fro3g00196 | ACH,WGDA | 6 | 256 | 14-3-3 family | AT1G26480 | 86.508 | 3.15e-162 | 449.0 | |
| Fro7g00743 | WGDA | 1 | 263 | 14-3-3 family | AT2G42590 | 76.046 | 4.18e-149 | 415.0 | |
| Fro8g00336 | WGDA | 6 | 263 | 14-3-3 family | AT2G42590 | 77.606 | 8.69e-148 | 412.0 | |
| Fro9g01289 | WGDA | 1 | 263 | 14-3-3 family | AT2G42590 | 76.426 | 9.52e-151 | 419.0 | |
| Fro10g01157 | ACH | 6 | 264 | 14-3-3 family | AT1G26480 | 82.239 | 7.07e-158 | 437.0 | |
| Fro11g00814 | ACH,WGDA | 1 | 259 | 14-3-3 family | AT3G02520 | 87.645 | 7.87e-168 | 462.0 | |
| Fro11g02498 | WGDA | 1 | 247 | 14-3-3 family | AT5G65430 | 85.657 | 2.44e-161 | 445.0 | |
| Fro15g01200 | . | 2 | 256 | 14-3-3 family | AT1G78300 | 87.109 | 6.15e-164 | 452.0 | |
| Fro15g01428 | ACH | 3 | 257 | 14-3-3 family | AT3G02520 | 87.843 | 5.18e-165 | 455.0 | |
| Fro16g00045 | . | 7 | 266 | 14-3-3 family | AT1G35160 | 86.59 | 5.51e-166 | 458.0 | |
| Fro17g00825 | . | 1 | 247 | 14-3-3 family | AT5G10450 | 84.615 | 7.75e-159 | 439.0 | |
| Fro17g00857 | . | 3 | 259 | 14-3-3 family | AT1G78300 | 85.603 | 8.42e-163 | 449.0 | |
| Fro18g00542 | . | 3 | 259 | 14-3-3 family | AT1G78300 | 87.209 | 4.16e-165 | 455.0 | |
| Fro18g01561 | WGDA | 6 | 267 | 14-3-3 family | AT1G26480 | 83.206 | 7.32e-163 | 450.0 |