Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fro18g01568 | ATGGAAGAATCAAGAAATCCATTTCTTCAGTCTAATGTTATTGAATCTGCTAATGGTTATAGCTCAAGATTCAACCCTGATAAACGTGGGCGCCAAAACTTCATTGCACCTGGTTTTCCAGGGTTGAAAAAACGAGGTCATGCACTTGGAAACCGTTCTTGGATCAAAATTGAGCAAAATGGGAACTCTAAAGTTGTGGAATTGGATAAGGCTACTGTAATGAGACATTGTTCTTTACCTGCTAGAGATCTTCGTCTTTTGGATCCACTTTTTATATATCCATCCACTATATTAGGTCGTGAGAAGGCTATTGTAGTTAGTCTTGAACAGATTAGATGTATAATCACAGCTGATGAGGTTTTCCTTATGAATTCATTGGACGGATCTGTAGTTCAGTATAAATCTGAATTGTGTAAACGTCTTCAGCAAGAGAAATATCACTCAGATGGCCTACCATTTGAGTTTAGGGCATTGGAACTAGCTTTGGAGTTTGCATGCCTCACTCTGGATACTCAGGTGAAAGAGTTGGAAATGGAAATTCATCCTGTGCTTGATGAACTTGCAAAATCTATAAGCACTCTCAATCTCGAGCGTGTTCGTAGATTCAAAGGCCACCTTCTAGCATTGACTCAACGGGTGCAAAAGGTTTGTGATGAAATAGAACAGCTAATGAATGATGATGGTGATATGGCTGAGATGTACTTAACTGAGAAGAAACAAAGGAACTCATGTAACGATTTATATGATCAAGACCAAGGGAATAATGTTGTTGGGCCTGGAGTGGGCTTAGGATCGAAATCTGCTCCTGTATCTCCTGTGGGCTCCACAAGTGGTGCAAATAACCTGCAAAGGGCGTTTAGTAATGTAAGTGCGCACAAACATGGAAGCTTGTTTGGTTCATCTGTTACCGGTGAAACTGAAAATATAGATCAACTTGAGATGTTGCTGGAAGCCTACTTTGTTGGAATTGATAACACTCTAAACAAGTTGCTTTCGCTCAAGGAATATATTGATGACACTGAAGATCTGATCAACATTAAACTTGGAAATGTCCAGAATAAGCTGATTAAGTTCGAGCTGCTCTTGACTGCGGCTACTTTTCTGGCAACCGTATTTGCAGTTGTGACAGCTGTATTTGGAATGAACTTTGAGGATGAAGTTTTCGATGAGCCAAACAGATTCAATTGGGTCGTTTCTATCAGCGCAGCGTTATGTGGAATTTTGTACATATGTTTCTTGCTTTATTTTAAACATAAGAAAGTTTTCCCTCTCTAG | 1275 | 39.53 | MEESRNPFLQSNVIESANGYSSRFNPDKRGRQNFIAPGFPGLKKRGHALGNRSWIKIEQNGNSKVVELDKATVMRHCSLPARDLRLLDPLFIYPSTILGREKAIVVSLEQIRCIITADEVFLMNSLDGSVVQYKSELCKRLQQEKYHSDGLPFEFRALELALEFACLTLDTQVKELEMEIHPVLDELAKSISTLNLERVRRFKGHLLALTQRVQKVCDEIEQLMNDDGDMAEMYLTEKKQRNSCNDLYDQDQGNNVVGPGVGLGSKSAPVSPVGSTSGANNLQRAFSNVSAHKHGSLFGSSVTGETENIDQLEMLLEAYFVGIDNTLNKLLSLKEYIDDTEDLINIKLGNVQNKLIKFELLLTAATFLATVFAVVTAVFGMNFEDEVFDEPNRFNWVVSISAALCGILYICFLLYFKHKKVFPL | 424 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fro18g01568 | 424 | CDD | Mrs2-Mfm1p-like | 54 | 421 | IPR039204 | - | |
| Fro18g01568 | 424 | PANTHER | RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL | 36 | 421 | IPR039204 | GO:0015095(PANTHER)|GO:0015693(PANTHER) | |
| Fro18g01568 | 424 | SUPERFAMILY | Magnesium transport protein CorA, transmembrane region | 361 | 413 | IPR045863 | - | |
| Fro18g01568 | 424 | FunFam | Magnesium transporter MRS2-1 | 41 | 125 | - | - | |
| Fro18g01568 | 424 | Pfam | Magnesium transporter MRS2-like | 59 | 242 | - | - | |
| Fro18g01568 | 424 | Gene3D | Magnesium transport protein CorA, transmembrane region | 128 | 355 | - | - | |
| Fro18g01568 | 424 | Coils | Coil | 206 | 226 | - | - | |
| Fro18g01568 | 424 | Gene3D | - | 45 | 125 | - | - | |
| Fro18g01568 | 424 | Gene3D | Magnesium transport protein CorA, transmembrane region | 362 | 420 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fro18g01568 | K16075 | magnesium transporter |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 2515798 | Fro | Fro11g00218 | Fro-Chr11:2034549 | Fro18g01568 | Fro-Chr18:22574494 | |
| 2525196 | Fro | Fro16g00331 | Fro-Chr16:3795642 | Fro18g01568 | Fro-Chr18:22574494 | |
| 2529039 | Fro | Fro18g01568 | Fro-Chr18:22574494 | Fro8g02002 | Fro-Chr8:29177596 | |
| 2544628 | Fro | Fro18g01568 | Fro-Chr18:22574494 | Fro17g01592 | Fro-Chr17:25695008 |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Fro3g00894 | . | 47 | 484 | MRS2 gene family | AT3G19640 | 66.594 | 0.0 | 567.0 | |
| Fro4g00777 | . | 47 | 484 | MRS2 gene family | AT3G19640 | 66.667 | 0.0 | 565.0 | |
| Fro6g00234 | ACH | 123 | 459 | MRS2 gene family | AT5G22830 | 75.74 | 1.06e-174 | 496.0 | |
| Fro8g02002 | . | 4 | 386 | MRS2 gene family | AT5G09690 | 73.057 | 0.0 | 551.0 | |
| Fro11g00218 | ACH | 1 | 442 | MRS2 gene family | AT1G16010 | 78.027 | 0.0 | 676.0 | |
| Fro11g01782 | . | 1 | 386 | MRS2 gene family | AT5G09690 | 71.465 | 0.0 | 550.0 | |
| Fro12g00785 | . | 47 | 483 | MRS2 gene family | AT3G19640 | 55.53 | 2.51e-155 | 444.0 | |
| Fro12g01948 | . | 1 | 436 | MRS2 gene family | AT3G58970 | 66.161 | 0.0 | 561.0 | |
| Fro15g01767 | ACH | 123 | 459 | MRS2 gene family | AT5G22830 | 80.119 | 0.0 | 530.0 | |
| Fro16g00331 | ACH | 1 | 442 | MRS2 gene family | AT1G16010 | 76.063 | 0.0 | 665.0 | |
| Fro17g00278 | . | 14 | 386 | MRS2 gene family | AT5G09690 | 66.057 | 2.66e-173 | 486.0 | |
| Fro17g01592 | ACH | 1 | 442 | MRS2 gene family | AT1G16010 | 80.313 | 0.0 | 712.0 | |
| Fro17g01701 | ACH | 67 | 484 | MRS2 gene family | AT3G19640 | 62.85 | 1.51e-161 | 460.0 | |
| Fro18g01568 | . | 1 | 421 | MRS2 gene family | AT2G03620 | 64.637 | 1.80e-177 | 500.0 | |
| Fro10000369.1g00003 | . | 1 | 421 | MRS2 gene family | AT2G03620 | 64.637 | 1.80e-177 | 500.0 |