Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fro18g01571 | ATGGCTCTTTTGGAATCAAACAAAAACAGAGGAGAGGTGAGAGTTCATGAGAATTTAGATGATCTGAGCACGAATTTGGCTGATTATATAGCAGAATTATCCGAGGCATCGGTTAAAGAACGTGGCTTTTTTTCCATTGCTTTATCTGGTGGTTCCATAATTAGCTTGATGAGGAATCTGTGTGGAGCTCCTTATAACAAGACTGTTGATTGGTCAAAATGGTATATATTTTGGGCAGATGAACGAGTGGTTGCCAAGACTCATGTCGATAGCAACTATAAGCTTGCTAAAGATCATCTTTTGTCTAAGTTGCCTATTGTTCCTAGTCATGTACATTCCATCAATGATTCCCTCACTGCAGAAGAAGCTGCAAATGAATACGAGTATGTAATCAGGCAACTGGTCAGAACCCGTGTGGTCAATGTGTCCGAGGTCAGCGACTGCCCGAAGTTTGACCTGATCCTTCTAGGGATGGGCCCGGATGGCCATGTGGCGTCTTTGTTTCCTAATCATTCGGTTCTTGAGGAAAAGAATGAATGGGTGACATTTATCACCACTTCTCCTAAGCCTCCACCTGAAAGAATCACCTTCACACTGCCCGTAATCAACTCTGCCGCCAATGTGGCAGTGGTGGTTACAGGTAGCGGGAAAGCTGAAGCTTCCAAGCTGGCGATAGATGACGTTGGACCCGAGGGCCCGGTGTTGCCAGCTAGGATGATTGAACCAGCTGTAGGGAAACTGGTGTGGTTTTTGGATAAACAGGCTGCTTCAAAGCTCAAGGGCTTTTCTCAATTTTCTAAGTAG | 804 | 45.02 | MALLESNKNRGEVRVHENLDDLSTNLADYIAELSEASVKERGFFSIALSGGSIISLMRNLCGAPYNKTVDWSKWYIFWADERVVAKTHVDSNYKLAKDHLLSKLPIVPSHVHSINDSLTAEEAANEYEYVIRQLVRTRVVNVSEVSDCPKFDLILLGMGPDGHVASLFPNHSVLEEKNEWVTFITTSPKPPPERITFTLPVINSAANVAVVVTGSGKAEASKLAIDDVGPEGPVLPARMIEPAVGKLVWFLDKQAASKLKGFSQFSK | 267 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fro18g01571 | 267 | SUPERFAMILY | NagB-RpiA-CoA transferase-like | 13 | 260 | IPR037171 | - | |
| Fro18g01571 | 267 | CDD | 6PGL | 20 | 251 | IPR005900 | GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro) | |
| Fro18g01571 | 267 | NCBIfam | 6-phosphogluconolactonase | 15 | 259 | IPR005900 | GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro) | |
| Fro18g01571 | 267 | PANTHER | 6-PHOSPHOGLUCONOLACTONASE | 5 | 260 | IPR039104 | - | |
| Fro18g01571 | 267 | FunFam | Probable 6-phosphogluconolactonase | 8 | 260 | - | - | |
| Fro18g01571 | 267 | Pfam | Glucosamine-6-phosphate isomerases-6-phosphogluconolactonase | 19 | 249 | IPR006148 | GO:0005975(InterPro) | |
| Fro18g01571 | 267 | Coils | Coil | 19 | 39 | - | - | |
| Fro18g01571 | 267 | Gene3D | - | 8 | 262 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fro18g01571 | K01057 | 6-phosphogluconolactonase [EC:3.1.1.31] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 92845 | Fro13g00142 | Fro18g01571 | |
| 397166 | Fro18g01571 | Fro3g00201 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 2529042 | Fro | Fro18g01571 | Fro-Chr18:22612895 | Fro4g01314 | Fro-Chr4:17776921 | |
| 2564254 | Fro | Fro13g00142 | Fro-Chr13:1878472 | Fro18g01571 | Fro-Chr18:22612895 | |
| 2576816 | Fro | Fro18g01571 | Fro-Chr18:22612895 | Fro3g00201 | Fro-Chr3:2139529 |