Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fso10g02387 | ATGGCAGTCAAGGCCGCGATTCACTTCTCCGACGTACCGCATTTGGATCACGTCAACGACGCCGCCGCGTCGCTGTCGCTCTACGCCACCCGTCTCCCCACCGGTTTGGATGTGAGTAATGGCCCGAAAGTTTTGCCCAAATTCATGGTGGTCGGTCACCGGGGCCATGGGATGAACATCTTACTGTCGAATGATAAGAGGATGAAGGTGTATAAGGAGAATTCGATTCTTTCGTTCAACAACGCCGCTAATCATCCTCTCGATTACATTGAATTTGATGTTCAGGTGACAAAAGACGACACACCAGTCATCTTTCACGACAATTTCATCCTCTCTGAAGAGAATGGTAACATAGTTGAAAAACGAGTCACCGATTTGACTTTGGATGAGTTCTTCAGTTATGGTCCTCAACGCGAAACAGGTCGGGTGGGAAAAACATTGCTGAGAAGATCAAACGGAAAGATTGTCGGGTGGGACGTTGAGATCGATGATCATTCTTGCACTCTTGAAGAAGCATTCCAGAAAGTGAACCCTTGTTTGGGATTTAACATTGAGTTGAAATTTGATGATTACATTGTTTATGAAGAAGAGTATCTCATTCATGTTCTTCAAGTTATCTTAAAGGTGGTATATGAAAACGCCCAAGAAAGACCTGTACTTTTCTCAAGCTTCCAGCCTGATGTGGCCTTGCTTATGAAGAAGCTTCAACATAAATACCCGGTGTACTTCTTGACAAACGGCGGAAATGAGATATTCGATGACGTCCGAATGAACTCGTTAGAAGAAGCGAAGAAGCTGGCCATATCGGGCGGTTTGGACGGAGTTGTTTCGGAAGTAAAGGGTATATTTAGAAACCCTTCAGTAGTAAGAGAGATCAAAGAATCAAATCTCTCCCTCCTAACTTATGGCAAACTAAATAACGTCCCAGAAGCCGTACACGTCCAATATCTTATGGGCGTCGAGGGTGTCATTGTTGATCTAGTACAAGAAATTACAAGTGCAGTTGCAGGTTTAAAAACAGGATTTGAAGGAGAGGAAGGAGGATCACAGGTGAAAGAGAACAGCGGCAAGATCGAACTGCCGTTCTTGCTGAGTTTGATTTCACAAGTAATTCAGCATTGA | 1122 | 44.21 | MAVKAAIHFSDVPHLDHVNDAAASLSLYATRLPTGLDVSNGPKVLPKFMVVGHRGHGMNILLSNDKRMKVYKENSILSFNNAANHPLDYIEFDVQVTKDDTPVIFHDNFILSEENGNIVEKRVTDLTLDEFFSYGPQRETGRVGKTLLRRSNGKIVGWDVEIDDHSCTLEEAFQKVNPCLGFNIELKFDDYIVYEEEYLIHVLQVILKVVYENAQERPVLFSSFQPDVALLMKKLQHKYPVYFLTNGGNEIFDDVRMNSLEEAKKLAISGGLDGVVSEVKGIFRNPSVVREIKESNLSLLTYGKLNNVPEAVHVQYLMGVEGVIVDLVQEITSAVAGLKTGFEGEEGGSQVKENSGKIELPFLLSLISQVIQH | 373 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fso10g02387 | 373 | FunFam | Glycerophosphodiester phosphodiesterase GDPD2 | 40 | 337 | - | - | |
| Fso10g02387 | 373 | SUPERFAMILY | PLC-like phosphodiesterases | 46 | 329 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Fso10g02387 | 373 | PANTHER | GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE | 43 | 338 | IPR051578 | GO:0046475(PANTHER) | |
| Fso10g02387 | 373 | ProSiteProfiles | GP-PDE domain profile. | 48 | 335 | IPR030395 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Fso10g02387 | 373 | Gene3D | Phosphatidylinositol (PI) phosphodiesterase | 45 | 336 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Fso10g02387 | 373 | Pfam | Glycerophosphoryl diester phosphodiesterase family | 53 | 328 | IPR030395 | GO:0006629(InterPro)|GO:0008081(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fso10g02387 | K18696 | glycerophosphodiester phosphodiesterase [EC:3.1.4.46] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 94547 | Fso10g02387 | Fso16g00658 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fso | Fso-Chr10:65890413 | Fso16g00658 | Fso-Chr16:8491380 | dispersed | |
| Fso | Fso-Chr6:5928897 | Fso10g02387 | Fso-Chr10:65890413 | transposed | |
| Fso | Fso-Chr10:65890413 | Fso18g02358 | Fso-Chr18:70572320 | wgd |