Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fso10g02388 | ATGAAGTCATCATTTGGGAAGATTGGGCGTAAGTTGACGATGCAGAAGAGCGATGTCAAGGAGATGAGAGATCATCAGCCTTCCGCTCATTTAGATGAGCTTGCTCAGGCTTCGAAGGATATGGAAGATATGAAGAACTGCTATGATGGCTTATTATCTGCGGCTGCTGCAACTGCAAATAGTATATATGAATTTTCGGAATCGCTAAATGAAATGGGGAACTGTTTAATGGGGAAAACTGCTGCAGCCGCTGATGCTGAAAGTGGAAATGCATTATCAACTTTGGGGAATTTGCAATTGGAACTTCAGAAAATTGCTGATACTTATCGTTCTTATGTAGTTGTGACGATTACTAACCCAGCAGATTCTCTTCTCAGTGAGCTACTAAAAGTGGAGGAGATGAAACTTCAGTGTGATGAGAAAAGAGAGGTGTATGATCACTTGATGGCTCAACATAGAGAGAAGGGAAGACTGAAGAATGGTAAAATAGAAAGTTCAATTGCACAAAAACTGAAAGAAGCTCAAGATGAATATGATGAAGTGGCTAGACTATGTGTATTTCGGGTTAAATCACTTAAGGAAGGACAATGGCGCAGTCTTTTAACACAAGCTGCTCGCCATCATGCCGCACAGGTGAATTTCTTTCGCAAAGGACTTAAAGCTGTTGAAGCAGTTGAACCTTTTATAAGAAATGTCACAGAAAAGCATCGTATTGATTGCCAACTCAGTGGATTGCCTGATCATGGTTCCCAGGAAGGTGAACCTATGAGTGGCTATGAAAGCACTGATGATGGAGGATTGAGTTTTGATTATAAACAAAAGAAACAAGGACTTGATGATGATGGCACCTCGCCAAATCCAATGGAGCTGGACCAGGTAGATGTCCCGTATTTTCAAGCTTCAAATCTAGAAGATTCACAGATAAATCAGAATAAACATAAAAGCGAGCAGCTTTTTGGTAAGCAAACTAGAGTTAGCAGTTATTCGGCCCCGCTATTCCCCGACAAAAATAATGCACCTGGAAAGCTTAAAGAAACCCAACCCACACCGAAAATTCACTCTTACATACTACCTCCACCCAATGTGGATACCCGGACTCCAATTTCAAAACCTGCTACATCTTCTTATCCCCTAGTTCAAAATCTGCAACATGATGCCACATCAACTGCTGCTTTGACCTCAAAAGTCCAGTCGACGGTTAAAGACGGTAACCCTGTTAATCCATCCATCCAGTTACCCGCTCCATCTACTGGAAGATTTTCATTCTCGCAACAGGATAACCATTACAGAACCGATGGTAGTAAGTAG | 1308 | 41.67 | MKSSFGKIGRKLTMQKSDVKEMRDHQPSAHLDELAQASKDMEDMKNCYDGLLSAAAATANSIYEFSESLNEMGNCLMGKTAAAADAESGNALSTLGNLQLELQKIADTYRSYVVVTITNPADSLLSELLKVEEMKLQCDEKREVYDHLMAQHREKGRLKNGKIESSIAQKLKEAQDEYDEVARLCVFRVKSLKEGQWRSLLTQAARHHAAQVNFFRKGLKAVEAVEPFIRNVTEKHRIDCQLSGLPDHGSQEGEPMSGYESTDDGGLSFDYKQKKQGLDDDGTSPNPMELDQVDVPYFQASNLEDSQINQNKHKSEQLFGKQTRVSSYSAPLFPDKNNAPGKLKETQPTPKIHSYILPPPNVDTRTPISKPATSSYPLVQNLQHDATSTAALTSKVQSTVKDGNPVNPSIQLPAPSTGRFSFSQQDNHYRTDGSK | 435 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fso10g02388 | 435 | CDD | BAR | 40 | 227 | - | - | |
| Fso10g02388 | 435 | MobiDBLite | consensus disorder prediction | 241 | 286 | - | - | |
| Fso10g02388 | 435 | MobiDBLite | consensus disorder prediction | 330 | 352 | - | - | |
| Fso10g02388 | 435 | Coils | Coil | 131 | 151 | - | - | |
| Fso10g02388 | 435 | PANTHER | HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE | 1 | 432 | IPR037488 | - | |
| Fso10g02388 | 435 | Gene3D | Arfaptin homology (AH) domain-BAR domain | 26 | 239 | IPR027267 | - | |
| Fso10g02388 | 435 | SUPERFAMILY | BAR-IMD domain-like | 32 | 230 | IPR027267 | - | |
| Fso10g02388 | 435 | MobiDBLite | consensus disorder prediction | 398 | 435 | - | - | |
| Fso10g02388 | 435 | Pfam | BAR domain of APPL family | 30 | 235 | IPR004148 | GO:0005515(InterPro)|GO:0005737(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fso10g02388 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 94548 | Fso10g02388 | Fso10g02747 | |
| 397972 | Fso10g02388 | Fso15g02832 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fso | Fso-Chr10:65898065 | Fso15g02372 | Fso-Chr15:71387816 | dispersed | |
| Fso | Fso-Chr10:65898065 | Fso10g02747 | Fso-Chr10:70102570 | wgd |