Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fso12g01894 | ATGTCAACCACCGTAGCAACATGGAAACTCGCCGATCACCCGAAGCTACCGAAAGGAAAAACGATCGCCGTCGTCGTGTTAGACGGTTGGGGTGAAGCTGCACCCGACAAATACAATTGCATTCACGTCGCCGAAACACCAACGATGGATTCCCTAAAAAACGGTGCACCTGATCGGTGGAGATTGGTGAAGGCTCATGGTAAGGCTGTTGGGCTTCCGACTGATGATGATATGGGGAATAGTGAAGTTGGGCATAATGCTCTTGGTGCTGGGAGAATTTATGCTCAAGGTGCAAAACTTGTAGATCTTGCTCTTGCCTCTGGAAAAATATATGAAGATGAAGGTTTCAGTTACATCAAGGAATCTTTTGCAAATAACACCTTGCACCTTATTGGATTGATGAGCGATGGGGGTGTCCACTCGCGCCTTGATCAGTTACAGTTGCTGCTCAAAGGTGCTGGTGAACGGGGTGCAAAGAGGATACGTGTTCATGTACTCACTGATGGTCGTGATGTTGTGGATGGTTCAAGTGTTGGCTTTGCAGAAACACTTGAAAAGGATCTTGCAGAGCTACGTGGTAAAGGCATTGATGCACAGGTTGCTTCTGGTGGAGGCCGCATGTATGTCACCATGGATCGTTATGAGAACGATTGGGAAGTTGTGAAACGTGGTTGGGATGCTCAGGTTCTTGGTGAAGCCCCACACAAATTTAAGAGTGCTGTTGAGGCTATCAAGAAGCTGCATGAAGCTCCTAATGCTAATGACCAGTACTTACCACCATTTGTGATTGTTGATGAGAGCGGGAAGCCCGTGGGTCCCATAAACGATGGTGATGCTGTTGTGACATTCAACTTCAGAGCAGATCGTATGACAATGCTTGCACAAGCACTCGAGTATGAGAAGTTTGATAAATTTGACAGAGTGAGGTTCCCAAAAATCCGCTATGCTGGAATGCTTCAGTATGATGGGGAGTTGAAGCTTCCAGGTCATTACCTTGTTTCTCCTCCATTGATAGAGAGGACATCTGGTGAATATCTTGTCAATAATGGTGTCCGCACCTATGCTTGCAGGTTAGATTTGTTTCTTTATGTTTTCTTGCAGAAAAGAAAAGAAAAAGAAACTCCTTGA | 1128 | 45.74 | MSTTVATWKLADHPKLPKGKTIAVVVLDGWGEAAPDKYNCIHVAETPTMDSLKNGAPDRWRLVKAHGKAVGLPTDDDMGNSEVGHNALGAGRIYAQGAKLVDLALASGKIYEDEGFSYIKESFANNTLHLIGLMSDGGVHSRLDQLQLLLKGAGERGAKRIRVHVLTDGRDVVDGSSVGFAETLEKDLAELRGKGIDAQVASGGGRMYVTMDRYENDWEVVKRGWDAQVLGEAPHKFKSAVEAIKKLHEAPNANDQYLPPFVIVDESGKPVGPINDGDAVVTFNFRADRMTMLAQALEYEKFDKFDRVRFPKIRYAGMLQYDGELKLPGHYLVSPPLIERTSGEYLVNNGVRTYACRLDLFLYVFLQKRKEKETP | 375 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fso12g01894 | 375 | PANTHER | 2,3-BISPHOSPHOGLYCERATE-INDEPENDENT PHOSPHOGLYCERATE MUTASE | 8 | 357 | IPR005995 | GO:0004619(InterPro)|GO:0006007(InterPro)|GO:0030145(PANTHER)|GO:0044262(PANTHER)|GO:0046537(PANTHER) | |
| Fso12g01894 | 375 | Pfam | Metalloenzyme superfamily | 20 | 356 | IPR006124 | GO:0003824(InterPro)|GO:0046872(InterPro) | |
| Fso12g01894 | 375 | Pfam | BPG-independent PGAM N-terminus (iPGM-N) | 102 | 322 | IPR011258 | GO:0004619(InterPro)|GO:0005737(InterPro)|GO:0006007(InterPro)|GO:0030145(InterPro) | |
| Fso12g01894 | 375 | FunFam | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | 96 | 339 | - | - | |
| Fso12g01894 | 375 | SUPERFAMILY | 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain | 96 | 331 | IPR036646 | GO:0004619(InterPro)|GO:0005737(InterPro) | |
| Fso12g01894 | 375 | SUPERFAMILY | Alkaline phosphatase-like | 21 | 357 | IPR017850 | - | |
| Fso12g01894 | 375 | Gene3D | - | 96 | 337 | IPR036646 | GO:0004619(InterPro)|GO:0005737(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fso12g01894 | K15633 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 2592212 | Fso | Fso12g01894 | Fso-Chr12:57328427 | Fso5g02318 | Fso-Chr5:63468760 | |
| 2637654 | Fso | Fso1g02040 | Fso-Chr1:59596351 | Fso12g01894 | Fso-Chr12:57328427 | |
| 2699129 | Fso | Fso12g01894 | Fso-Chr12:57328427 | Fso14g02501 | Fso-Chr14:59617052 |