Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fso12g01961 | ATGGGGGAAACGAAATCGACATCAGAGAACAGGTTGAAGCCATCGACGAAGTGTTCTGATGAGAATCAGGTGCCGTTGAAGTGTAGAAACAACAATGTGCAATCGAATTTGAAGCCCAGATCGATTTGGGGCTCGAATATTGTTAAAGGGTTTTCGGGTGATAAGAAAACAAGATCCCAACAAGTGGTGAAGAAATCTCAACAGCAACCTGTTACAACAGTGTCCAACTCGAATTCAAGAAACCCCTTTGGTTCTAATCGAGCGAAACGGTCTCTTATCGGAGATTTATCGTGTTCTGTCACTGCTACACAGGTTCATCCTCAAGGGGTTCATCATCACTGTGAACAGAACCAGAGGTTGTATAAGTCATCGTCTTCTTCGGGCTCTCGTGATCTGTTTGCTGAGCTTGATCAACTCAGAAGCTTGCTTCAAGAGTCTAAAGATAGAGAAGCTAAGTTGCAAGCTGAGTTGTGTGATTTCAAGAAGAAAAATCTTCAGGCTTTGGAGCTTGAAAGGATAGTTGAGTCGAAGACTAGTGAAATCGAATCTCTTAAAAGCAAGATTGATTTGCTCGAATCGGAGAACACTAGTCTTTCTGAGCAGTTGAATTGTCAGCAGGTGCAAGAAAATATAAAAAAAGGGGTTGTTAATAATAGTGTTGAGGTAGATGTTCTTAAGTTGAGGAGGTTGAATGCTGAGCTTCATCTTCAAAAGAGAAATCTTTGTTGCAGAATTTCTTCAATGGAGTCAGAACTAGCTGCCATTGCTAAAGATTCTGAGAATGAATTTGTTAAGAAGATAAAAGCTGAGGCGTCTATGTTAAGACAAACAAATGAAGATTTATGTAAACAAGTTGAAGATCTACAAGTAAGTCGATTAAACGAAGTTGAGGAGCTTGTTTATCTTAGATGGGTCAATTCCTGTCTTAAAAATGAGTTGCAAAATTCGGCGTTTGTGGCTTCTGAGATAACATCAAGTCCAGCTTCTGTCGGATGGCTCAATGGTTCTATGTCAAGTGATGAAAGTTCTGAACATGGTAGTACCCAAAAGAAGCTAAGTTTGATCAAGAAAATGAAAAAATGGCCTGTTCTTGATGAAGAAACAAACGCCTCTGAACCGATGAATTATAAATTGAATCTTGGTTGGTCAGAAGGAAGAAGGCATTCTATCAGTGGAGCAAATTGCTGTCAGGAAGATTTGGTGGTGAATAAAAGAAGACAATCTGATGGTTTTATATGTTCAATGGAGATGGAGGGTGTAAATGATTTGAATGTGATCCAAGGGTCACAATTGCGTGAAGCTACGAAACTGAAAACATTTTTGGATGTGGAAAAGAGGGCGTTGCGTGTTCCTAATCCCCCTCCGAGGCCTTCTAGCTTTACTTCTAAGGAACATACAGAGGTTACTAGTCGAGTGTCACCGCCACCTCCACCACCACCACCACCTCCGCCGCCACCACCTCCAAAATTCAGGGGAAGAAACAATGGTGGAGGGGTTGTTCAAAGAGCTCCAGAAGTTGTTGAGTTTTATCATTCTCTTATGAAAAGAGATTCCAGGAAAGATTCACTAAATGATGGGATTTGTGATGCCTTAGATGTCAATAATGTCCGAACTAGTATGATTGGTGAAATTGAAAACCGGTCATCACATTTGCTTGCTATAAAGGAGGATGTTGAGACTCAAGGGGAATTTGTGAATTCTTTAATACGCGAGGTCAACAATGCTGTTTATCCGGATATAGAAGATGTGGTGGCTTTTGTGAACTGGCTGGATGATGAACTCGGCTTTCTTGTGGATGAGAGAGCTGTGCTGAAACACTTTGATTGGCCGGAGAAGAAAGCCGATACACTAAGAGAGGCAGCATTTGCGTATCGTGATCTAACGAAGCTAGAGCATGAAATTTCAAACTACAAGGACAATTTCCACATACCCTGTGACTTGGCATTGAAGAAAATGGTTTCCTTGTCTGAAAAAATGGAGCGTATCGTTAATAACCTTCTTAGAACAAGAGATCTGTTGATGCGTAATTGCAAAGAGTTCCATATTCCTGCAGATTGGATGCTTGATTCGGGAATATTAAACAAGATTAAGCTGGGGTCGGTTAAGTTGGCAAAGAAATACTTGAGAAGAGTTGCTACAGAACTTCAAACGAAGGGAATGTCGGAGAAAGATCCATCAATGGACTATATGCTACTTCAAGGAGTGCGATTTGCTTTCCGCATTCATCAGTTTGCTGGTGGATTTGATGTCGATACAATGCATGCATTCGAAGAGCTTCGCAACGTAGCTCTTGTTTTGAACAAAAAATAG | 2310 | 40.87 | MGETKSTSENRLKPSTKCSDENQVPLKCRNNNVQSNLKPRSIWGSNIVKGFSGDKKTRSQQVVKKSQQQPVTTVSNSNSRNPFGSNRAKRSLIGDLSCSVTATQVHPQGVHHHCEQNQRLYKSSSSSGSRDLFAELDQLRSLLQESKDREAKLQAELCDFKKKNLQALELERIVESKTSEIESLKSKIDLLESENTSLSEQLNCQQVQENIKKGVVNNSVEVDVLKLRRLNAELHLQKRNLCCRISSMESELAAIAKDSENEFVKKIKAEASMLRQTNEDLCKQVEDLQVSRLNEVEELVYLRWVNSCLKNELQNSAFVASEITSSPASVGWLNGSMSSDESSEHGSTQKKLSLIKKMKKWPVLDEETNASEPMNYKLNLGWSEGRRHSISGANCCQEDLVVNKRRQSDGFICSMEMEGVNDLNVIQGSQLREATKLKTFLDVEKRALRVPNPPPRPSSFTSKEHTEVTSRVSPPPPPPPPPPPPPPPKFRGRNNGGGVVQRAPEVVEFYHSLMKRDSRKDSLNDGICDALDVNNVRTSMIGEIENRSSHLLAIKEDVETQGEFVNSLIREVNNAVYPDIEDVVAFVNWLDDELGFLVDERAVLKHFDWPEKKADTLREAAFAYRDLTKLEHEISNYKDNFHIPCDLALKKMVSLSEKMERIVNNLLRTRDLLMRNCKEFHIPADWMLDSGILNKIKLGSVKLAKKYLRRVATELQTKGMSEKDPSMDYMLLQGVRFAFRIHQFAGGFDVDTMHAFEELRNVALVLNKK | 769 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fso12g01961 | 769 | MobiDBLite | consensus disorder prediction | 52 | 86 | - | - | |
| Fso12g01961 | 769 | MobiDBLite | consensus disorder prediction | 448 | 498 | - | - | |
| Fso12g01961 | 769 | MobiDBLite | consensus disorder prediction | 7 | 23 | - | - | |
| Fso12g01961 | 769 | Coils | Coil | 167 | 208 | - | - | |
| Fso12g01961 | 769 | MobiDBLite | consensus disorder prediction | 47 | 88 | - | - | |
| Fso12g01961 | 769 | Coils | Coil | 264 | 284 | - | - | |
| Fso12g01961 | 769 | Coils | Coil | 620 | 640 | - | - | |
| Fso12g01961 | 769 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 477 | 629 | - | - | |
| Fso12g01961 | 769 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
| Fso12g01961 | 769 | Coils | Coil | 129 | 156 | - | - | |
| Fso12g01961 | 769 | PANTHER | PROTEIN CHUP1, CHLOROPLASTIC | 65 | 761 | IPR040265 | GO:0009658(PANTHER)|GO:0009707(PANTHER) | |
| Fso12g01961 | 769 | MobiDBLite | consensus disorder prediction | 471 | 491 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fso12g01961 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fso | Fso-Chr12:58153346 | Fso8g01903 | Fso-Chr8:48532739 | dispersed | |
| Fso | Fso-Chr12:58153346 | Fso7g00820 | Fso-Chr7:10333828 | transposed | |
| Fso | Fso-Chr12:58153346 | Fso12g00676 | Fso-Chr12:10814145 | transposed |