AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fso1g01515 ATGACTTTAATTCAACAAATGAAAGAAGTATATGAAAGCCTAGAGAAACAAGAGAAGATAAATCTATTTGGGCCTTCAGGAATCGGGAAAACACGAATGGCGAAGAAAATAAGTGAATATGCCATTAGAGAGAAACAAACCACAATGGGGAAGAAAGTAAGTGATCAACAAGCCATTAAAGGGAAATTGTTTAACTTCACACTCTGGGTGTTTATGTGTAGGAAGTATACCCTTGACTCCCTCTCCCAAAGTATTGCTAGACAATTATTCTTAATCCGCACGTACGAGGAGTGGGAGGTTGAGGATGACAACAACAAACATGAGCGTGATGCAGATAGCACAGATAACTTGATTCAAAGTATAAAAGAAAAGCTTAAAGGAAACAAAATTCTTGTTATTCTTGATGATGTTCCTAATGGCAAAACCAAAAGTTTAAATGAAACAACGTTTTGGTCAGTGTGGGAACAAATGTTGCCTGTTGCTGATCTAAATATAACAGTTAAACAGATTTTAATCTCTAGAATAAAGAGAGATGATGAAGATTTTGTCTCCTTTGAGGTGATTAAAGCTTTACCTAGAGAAGTCTCCATCAATTTACTTAAAGAAAAACTCATTGAAAAATTTAATGGTGATACTCCATTAGCTGAAAAGGTACAAAATTTAGGTGTAAAACTCCTTGACAAATTTAATGGTGATTTGCCTGGAAATGTTATCATGATAGCGAAAGTTTTGAACTACTTTTGCCTCGATGCATCGGGAATGTCGATTATAACGAAAGAGTTGGAAGAAGCTTCTGATCAAGACTACCATTTAAGCAAGTTCTTGTGCATGAAGGATGATGTGTTACCGATTGATGTTCTAAAAGATCTATGGTGGCACGGTGACCATTTTTATCGTAATTCTGGAAGTGTTCACTACAGTGAGTTGATAACTTACTGGATCTTGGAAGGATACCTTGGTGTTGGGAGCATGTCAAAGCTGTACCAAAAGGGTCATGGTTTGTTAATGGACCTTATTGATTGTGGGGTGATCAAAGTGCAAGAGGGTGGTTATGTTTTCATGGATAACTCACTTATAAATGCGCGCGATCTGTACCAGCATGTTGAGCGGAACCCAAGACTCGGGTTTGCAGCGGTGATCAATTCTGAGGAAGAAGGGTTTGGAAGGATCACACACAATGATGGAACTGAACAAGCTCCAACAAGAAGAAAGACGGAAAGAGCGCCATTAGACAAAAGCGAGTGGGAATCTTTTGTTGTTGCTGGATGGAACAATTGTTACTGA 1284 38.16 MTLIQQMKEVYESLEKQEKINLFGPSGIGKTRMAKKISEYAIREKQTTMGKKVSDQQAIKGKLFNFTLWVFMCRKYTLDSLSQSIARQLFLIRTYEEWEVEDDNNKHERDADSTDNLIQSIKEKLKGNKILVILDDVPNGKTKSLNETTFWSVWEQMLPVADLNITVKQILISRIKRDDEDFVSFEVIKALPREVSINLLKEKLIEKFNGDTPLAEKVQNLGVKLLDKFNGDLPGNVIMIAKVLNYFCLDASGMSIITKELEEASDQDYHLSKFLCMKDDVLPIDVLKDLWWHGDHFYRNSGSVHYSELITYWILEGYLGVGSMSKLYQKGHGLLMDLIDCGVIKVQEGGYVFMDNSLINARDLYQHVERNPRLGFAAVINSEEEGFGRITHNDGTEQAPTRRKTERAPLDKSEWESFVVAGWNNCY 427
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fso1g01515 427 Pfam NB-ARC domain 7 244 IPR002182 GO:0043531(InterPro)
Fso1g01515 427 Coils Coil 104 124 - -
Fso1g01515 427 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 268 IPR027417 -
Fso1g01515 427 Gene3D - 2 178 IPR027417 -
Fso1g01515 427 PANTHER DISEASE RESISTANCE PROTEIN RP 7 359 IPR044974 GO:0006952(InterPro)|GO:0098542(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fso1g01515 - -