Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fso1g01973 | ATGGGCAATTACAGGCTCAGATTATCAACTCTAATCCCCAATTCATGGATCTACACCTCCATCACGGGCACCAAACTCAAGAACAAACTAACCAAAACCCAACCCATAACAACTTCATCATCTTCACCCTCGTCTTCTTCATCGTTTTCCGCATCAAAATCTGCAATTGATCAAAGAAAATCATACTACTTCACCAGAGACCTCATCGTGCCCGACCCGATTACCCGTAATCAGAACCTATCACCACTTAAAACCGATCACCAACCCGACCCGAGACGAAAATCATCCAAGAAAAAACGACCCATCACCCCAAAGAAACCAATTCGCCTGAAATCGGTGTCGCCGGAGCTCAACCCCGCCGGAAAATGCAGCTGCCGGAGTCCCACCGAACAATCTCTCATTTCCCCAAAAGACGACGTTTATACGAAAGTTAACCTCGCACCGATCATAACCAAACCCACGAAGCCAAACGAATTCGGGCCGGGTAAATGGGTGGTCGCCGGAGATCGCCGGAGTTCAACGGCTAACGACGGCGTAACTCAGAGTCCGGCGAGAAAAGCTAAGAACAACAGTTATTCTCCGAGGTTGGGGAACAGGGTGAGGATCAACGGGATAAACGCCAGTGGCCGGAGAAGATCCGGCGACCGGCGGAGCTTGTCGGAAAGTATGGTGGTGGTGAAGACGACGGTGGATCCGTTTAGGGATTTTAAAGAGTCGATGGTGGAGATGATAATGGGGCATAATATTACGAGTTCTAAAGATTTGGAAGATCTTCTTGCATGTTATTTATCATTGAATTCTGATGAATATCATGATTTGATCATCAAGGTATTTAAGGAAATATGGTTTGAGTGTACTGATGTTAGACTGTAG | 873 | 46.85 | MGNYRLRLSTLIPNSWIYTSITGTKLKNKLTKTQPITTSSSSPSSSSSFSASKSAIDQRKSYYFTRDLIVPDPITRNQNLSPLKTDHQPDPRRKSSKKKRPITPKKPIRLKSVSPELNPAGKCSCRSPTEQSLISPKDDVYTKVNLAPIITKPTKPNEFGPGKWVVAGDRRSSTANDGVTQSPARKAKNNSYSPRLGNRVRINGINASGRRRSGDRRSLSESMVVVKTTVDPFRDFKESMVEMIMGHNITSSKDLEDLLACYLSLNSDEYHDLIIKVFKEIWFECTDVRL | 290 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fso1g01973 | 290 | MobiDBLite | consensus disorder prediction | 168 | 193 | - | - | |
| Fso1g01973 | 290 | ProSiteProfiles | OVATE domain profile. | 225 | 284 | IPR006458 | - | |
| Fso1g01973 | 290 | MobiDBLite | consensus disorder prediction | 173 | 193 | - | - | |
| Fso1g01973 | 290 | Pfam | Transcriptional repressor, ovate | 230 | 284 | IPR006458 | - | |
| Fso1g01973 | 290 | NCBIfam | uncharacterized plant-specific domain TIGR01568 | 223 | 284 | IPR006458 | - | |
| Fso1g01973 | 290 | Pfam | DNA-binding domain | 1 | 48 | IPR025830 | GO:0003677(InterPro) | |
| Fso1g01973 | 290 | PANTHER | TRANSCRIPTION REPRESSOR OFP7-RELATED | 45 | 285 | IPR038933 | GO:0045892(InterPro) | |
| Fso1g01973 | 290 | MobiDBLite | consensus disorder prediction | 29 | 51 | - | - | |
| Fso1g01973 | 290 | MobiDBLite | consensus disorder prediction | 73 | 132 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fso1g01973 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 96138 | Fso1g01973 | Fso5g02360 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 2606352 | Fso | Fso1g01973 | Fso-Chr1:58178732 | Fso5g01990 | Fso-Chr5:59507206 | |
| 2628230 | Fso | Fso1g01973 | Fso-Chr1:58178732 | Fso14g02124 | Fso-Chr14:51669956 |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Fso | Ovate | 1.3e-22 | No_clan | TF | OFP |