Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fso1g02023 | ATGGGACTTTGCTGCTTCTCCTCGACGCCGACTGATGAAGAAGAGACCGATAGTCATCCTGAGTTTGCAGGGGGTAATGTGACTCTCATCACTACCAAGAGTGCTTGGGACCAAAAGCTGTCAGAAGCAAAGATTCAAGGCAAAGTAGTGATTGCCAACTTCAGTGCAACTTGGTGTGGTCCATGCAAATCAATTGCACCACACTACGTTGAGCTATCAGAGAAGCATCCGTCTCTTATGTTCTTGACCATTGACGTTGATGAATTAACGGAGTTTAGCACAGAAATGGATGTAAAAGCTACTCCAACATTCTTCTTCTTTAGAGATGGTAAACAGATTGATAAACTTGTGGGAGCCAACAAGCCTGAACTGCAGAAAAAGATAACCGCAATTGTTGATTCACAGGTCCCCACTGGTCAGAAGTAA | 426 | 44.13 | MGLCCFSSTPTDEEETDSHPEFAGGNVTLITTKSAWDQKLSEAKIQGKVVIANFSATWCGPCKSIAPHYVELSEKHPSLMFLTIDVDELTEFSTEMDVKATPTFFFFRDGKQIDKLVGANKPELQKKITAIVDSQVPTGQK | 141 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fso1g02023 | 141 | Pfam | Thioredoxin | 28 | 129 | IPR013766 | - | |
| Fso1g02023 | 141 | PRINTS | Thioredoxin family signature | 97 | 108 | - | - | |
| Fso1g02023 | 141 | PRINTS | Thioredoxin family signature | 58 | 67 | - | - | |
| Fso1g02023 | 141 | PRINTS | Thioredoxin family signature | 50 | 58 | - | - | |
| Fso1g02023 | 141 | Gene3D | Glutaredoxin | 1 | 139 | - | - | |
| Fso1g02023 | 141 | FunFam | Thioredoxin | 24 | 133 | - | - | |
| Fso1g02023 | 141 | SUPERFAMILY | Thioredoxin-like | 23 | 132 | IPR036249 | - | |
| Fso1g02023 | 141 | CDD | TRX-family | 40 | 128 | - | - | |
| Fso1g02023 | 141 | ProSiteProfiles | Thioredoxin domain profile. | 13 | 133 | IPR013766 | - | |
| Fso1g02023 | 141 | ProSitePatterns | Thioredoxin family active site. | 51 | 69 | IPR017937 | - | |
| Fso1g02023 | 141 | PANTHER | THIOREDOXIN | 25 | 130 | IPR050620 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fso1g02023 | K03671 | thioredoxin |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 2606395 | Fso | Fso1g02023 | Fso-Chr1:59300202 | Fso7g00085 | Fso-Chr7:984193 | |
| 2637651 | Fso | Fso1g02023 | Fso-Chr1:59300202 | Fso12g01885 | Fso-Chr12:57258603 |