AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fso1g02025 ATGATGAATCGGAATTCTTCTAAGGACTCGTTGATCGCTACAGGAGGTCGAAATCTCCACGTTAACGGTGTTTATAATGCTCCGGTGACCGGATTATTATCTCACCGGCGACTCAGGAGTTTCACCACCACAACCGAAGATTTTGGCAACAATAACAGCAGCAACGTAGATCTATCCTCACGTAATCGTCGTACGCTCTCCGTCGCACTTTCCGATGAATCCGACTTGCAGGTGAGGATGGAAAAGCTTTCGACTGTATCAACAATGCCTGCAAAAAGCGTATTAGATGATCTACTTTCATCTAATGAAGGGGGAAAGCATGATTATGACTGGCTCTTGACTCCTCCAGAAACTCATCTACTTCCATCTTTGAATGGAAATGAATCTCAACCAAAATCAGTTGCCCCAAAAAGGATGTCTTCAGTTAGATCAGGCTCAACAAATAGAACCTCAAGGCTTTCTGTTTCTCAATCTGAGCATAACCATCCTTCAAGACCAGCGAGAAGCAGTTCAGTGACTCGCCCGTCAATCACTACCACCCAAAACTCAAACAGAAACTCTAATATTTTAAACACCAGCTCTGCTTCTGTCTCTTCTTACAAAAGACCATCCACCCCGACTAACCGTCTACCATCAGCCTCCAGACCCTCCACCACTTCTTCCCGTACAACACCTTCTAGAAGCCGCCCATCCTCCACCACCACGACTTACACCGACAAAACCATTAGACCATCAACTCCTACTCCACGTCCCCAGTCACCTACTGTTCGACCAGCTTCTAGGCCATCAACTCCAACTCGTAGGAACCCAACACCTTCTAGTACTACTGCTCCATCTTTTAACAACCGGAGTGTGGGACCCACGTCTAGATCAAACTCTTCTGTCTCACGGGTCAGAGCCATCAATCTTCCTGATTTTCCGAATGAAACACCACCAAATCTCAAAACAAGTGTGCCAGAATGGCCTATGTCTGCTGGTAGGTCCAGGCGAGGTGCAGCCATGACTGTGAAGGGAAATGTAGAGAATACAAACACAAAAGGACAGTCGTCGCCCATTATCACTAGGGGTACACTTGCAGCACCACCTGGAAGGGGGCGGTCACACACTAACGAGCATATGGTTGAACCAGTTACAAGAAAACATATAAAGGTGTTAAGTTCAGAGCCTGGTGCAGAGTTTGGGAGGAGCATCTCAAAGAAATCACTTGACATGGCCATAAAACATATGGATATAAGAACAAGAGGCACGCGCCCACTCTCCGGGTCAACTCTCTTTCCTCAAAGCATTCGATCGAGTAATGCTTCAAGTGCAAGGGACAATATTAACTACAAAAGTGGAACTTTAATTAATGGTTATTCAGAGAACAAAGTGAAACCCGTGACCATAGAAGATAAAAGTGCATATTCTTCTAAACTAGCACTTGTAGATGTATGCGAGAGCTTGAGGTACGACACGATTTTACTGAAGGAAGACCTGAAGAACACAAGTTGGTTGCATAGTGAAGATGAGAATAGTGATCAAAGTCTATTGTTTGATAATGGATTCGAGCCACTCCCCGAACCTTTGCACCCTTGTGACATGTCGTCTTTATATTCATATATTCACATGTTATCCATGTTGCATCTTTTAACTCTCTATTTAATTTATCATAAAATTCATATAGATCAGTAA 1671 44.17 MMNRNSSKDSLIATGGRNLHVNGVYNAPVTGLLSHRRLRSFTTTTEDFGNNNSSNVDLSSRNRRTLSVALSDESDLQVRMEKLSTVSTMPAKSVLDDLLSSNEGGKHDYDWLLTPPETHLLPSLNGNESQPKSVAPKRMSSVRSGSTNRTSRLSVSQSEHNHPSRPARSSSVTRPSITTTQNSNRNSNILNTSSASVSSYKRPSTPTNRLPSASRPSTTSSRTTPSRSRPSSTTTTYTDKTIRPSTPTPRPQSPTVRPASRPSTPTRRNPTPSSTTAPSFNNRSVGPTSRSNSSVSRVRAINLPDFPNETPPNLKTSVPEWPMSAGRSRRGAAMTVKGNVENTNTKGQSSPIITRGTLAAPPGRGRSHTNEHMVEPVTRKHIKVLSSEPGAEFGRSISKKSLDMAIKHMDIRTRGTRPLSGSTLFPQSIRSSNASSARDNINYKSGTLINGYSENKVKPVTIEDKSAYSSKLALVDVCESLRYDTILLKEDLKNTSWLHSEDENSDQSLLFDNGFEPLPEPLHPCDMSSLYSYIHMLSMLHLLTLYLIYHKIHIDQ 556
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fso1g02025 556 PANTHER GASTRIC MUCIN-LIKE PROTEIN 48 507 - GO:0043622(PANTHER)|GO:0055028(PANTHER)
Fso1g02025 556 MobiDBLite consensus disorder prediction 120 246 - -
Fso1g02025 556 MobiDBLite consensus disorder prediction 259 299 - -
Fso1g02025 556 MobiDBLite consensus disorder prediction 341 355 - -
Fso1g02025 556 MobiDBLite consensus disorder prediction 341 370 - -
Fso1g02025 556 MobiDBLite consensus disorder prediction 120 325 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fso1g02025 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
95685 Fso14g02507 Fso1g02025
96140 Fso1g02025 Fso5g02336
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2596744 Fso Fso14g02507 Fso-Chr14:59704057 Fso1g02025 Fso-Chr1:59383175
2606396 Fso Fso1g02025 Fso-Chr1:59383175 Fso8g01516 Fso-Chr8:41694048
2652143 Fso Fso1g02025 Fso-Chr1:59383175 Fso5g02336 Fso-Chr5:63715470