AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fso1g02035 ATGAATCTTCAATTTCGAAGTCCAGTGAAGCTTGTTCTGGTTATTTGCTTCTTCTGGTGGCCAATTGTTGGATCTCAAATATCTAATCCTCTACCAAAGCCTGCGAGGGCTCTTGATGCGACCTTACAGGACTATGCATATCGCGCATTTATTCGTCCACGTACCGGTATTCCCTTTGATGGTGTTGTCCCTCCATATTTGACCGGGATTAAGATATCAGCAATGAGGCTCAGAAGTGGTAGTCTGTATCGTAGAGGCGTTCAAAACTATAAAGAATTCGTAATTCCGGTTGGCATAAGAGAGCAACCGTATGTGGAGAGACTGGTTCTGGTCTATCAAAACTTAGGAAATTGGTCCACAACTTATTACTCTTTACCTGGTTACATTTATCTAGCTCCCGTGTTAGGTCTTCTTGCTTATAATGGTTCAGATTTGGCAGCTTCTAACCTACCAGAACTCGACTTGTGGGCTTCTGAGGAAGCCATTACAATACATTTTGGAAGAATACGGCCGGTACCAATTGGGTTGGTTGCAAAGTGTGCTTGGTTTGATCTAAATGGTCAGGTGAATTTCACAAATTTGTTATCTGGGAATGTATGTTCAACCACTGAACAGGGGCATTTCTCCATTGTAGCTGAATCAGCTGTCCCTCCTGTTCCAGTACCTCCTGCACCACCTCAACCTGCACAATCAAAACCTACACCTAGTAGTAGAAAGAACAATGAGGCTAGGATTTGGGGTATTATTGGTGCAGTAACTGGTGGAACCGCATTGCTGGTGCTATTGGTGTTGTTTATATTGTGGGCGTGGCGGTACAAAAAGAGGAAAAGAATGCGTGAATTAGAAAGGGCTGCAGATGCTGGTGTAGCATTGAGGATGACCAGAATTGGGAGCATGAGAGCACCATTTGCATTGGCCACAAGAACAATGCCGAATTTTGAAAGCGACTTAGATGCTTGA 960 43.85 MNLQFRSPVKLVLVICFFWWPIVGSQISNPLPKPARALDATLQDYAYRAFIRPRTGIPFDGVVPPYLTGIKISAMRLRSGSLYRRGVQNYKEFVIPVGIREQPYVERLVLVYQNLGNWSTTYYSLPGYIYLAPVLGLLAYNGSDLAASNLPELDLWASEEAITIHFGRIRPVPIGLVAKCAWFDLNGQVNFTNLLSGNVCSTTEQGHFSIVAESAVPPVPVPPAPPQPAQSKPTPSSRKNNEARIWGIIGAVTGGTALLVLLVLFILWAWRYKKRKRMRELERAADAGVALRMTRIGSMRAPFALATRTMPNFESDLDA 319
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fso1g02035 319 PANTHER PROTEIN, PUTATIVE (DUF1191)-RELATED 13 317 IPR010605 GO:0016020(PANTHER)
Fso1g02035 319 MobiDBLite consensus disorder prediction 219 239 - -
Fso1g02035 319 Pfam Protein of unknown function (DUF1191) 34 212 IPR010605 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fso1g02035 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
96141 Fso1g02035 Fso2g02727
96142 Fso1g02035 Fso5g02331
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2606403 Fso Fso1g02035 Fso-Chr1:59480906 Fso2g01272 Fso-Chr2:29340064
2637653 Fso Fso1g02035 Fso-Chr1:59480906 Fso12g01887 Fso-Chr12:57270820
2652144 Fso Fso1g02035 Fso-Chr1:59480906 Fso5g02331 Fso-Chr5:63640025