AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fso1g02038 ATGGACATCGAGAAGAAAGACGAACAACCTCTCAGATCCACCACCACCGCCTCCGCCCCCGCCGCCGTCTCCGGCGGCTCCTCCGGCAACCGCCACCGCCGGCTACGCATCATCATCTGCTCATCGCTCATCGGAATCACACTCACCATCGCCTTAATCATACTCATTCTAGCCCTCACCGTCTTCAAACCTAAAAAGCCCGTTCTAACAGTCGATTCCGTATCGATTCAAGACCTTGACGTCTCCGTGAATCCGATTCCGATTCAGGTGTCGTTGAACCTCTCGCTTGCTCTCGGAATCACGATCGAGAATCGGAATAAGGTGAGTATCAGTTACCGGAGTAGCTCATCGGCGTTACGTTACAGAGGTAAGGAGATCGGTAGCGTGCCGATTCCGGCGGGAGAGCTTGGGGCGGATGATCTGACGGAGTTGAATCTGACGCTTACGGTGTTTGCTGATCGGTTGGTGTCTGATTCGGAGATCTATGGGGATGTTCTTAGAGGTAATTTGCCGATTTCTACTTATACGAGAATCAAAGCGAAAGTTCGTGTGCTGTTCTTTCATATTCATGTTACGTCTACTTCCACCTGTGATGTGAATATTGATGTGCAGTCTAGACGTGTTGCGAATCAGACGTGCCAGTATAAGAACAAAATTTAG 660 50.3 MDIEKKDEQPLRSTTTASAPAAVSGGSSGNRHRRLRIIICSSLIGITLTIALIILILALTVFKPKKPVLTVDSVSIQDLDVSVNPIPIQVSLNLSLALGITIENRNKVSISYRSSSSALRYRGKEIGSVPIPAGELGADDLTELNLTLTVFADRLVSDSEIYGDVLRGNLPISTYTRIKAKVRVLFFHIHVTSTSTCDVNIDVQSRRVANQTCQYKNKI 219
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fso1g02038 219 MobiDBLite consensus disorder prediction 1 29 - -
Fso1g02038 219 Gene3D - 55 202 - -
Fso1g02038 219 Pfam Late embryogenesis abundant protein 100 195 IPR004864 -
Fso1g02038 219 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 30 213 - -
Fso1g02038 219 SUPERFAMILY LEA14-like 52 158 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fso1g02038 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
96144 Fso1g02038 Fso5g02320
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2652146 Fso Fso1g02038 Fso-Chr1:59586612 Fso5g02320 Fso-Chr5:63497901