Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fso1g02038 | ATGGACATCGAGAAGAAAGACGAACAACCTCTCAGATCCACCACCACCGCCTCCGCCCCCGCCGCCGTCTCCGGCGGCTCCTCCGGCAACCGCCACCGCCGGCTACGCATCATCATCTGCTCATCGCTCATCGGAATCACACTCACCATCGCCTTAATCATACTCATTCTAGCCCTCACCGTCTTCAAACCTAAAAAGCCCGTTCTAACAGTCGATTCCGTATCGATTCAAGACCTTGACGTCTCCGTGAATCCGATTCCGATTCAGGTGTCGTTGAACCTCTCGCTTGCTCTCGGAATCACGATCGAGAATCGGAATAAGGTGAGTATCAGTTACCGGAGTAGCTCATCGGCGTTACGTTACAGAGGTAAGGAGATCGGTAGCGTGCCGATTCCGGCGGGAGAGCTTGGGGCGGATGATCTGACGGAGTTGAATCTGACGCTTACGGTGTTTGCTGATCGGTTGGTGTCTGATTCGGAGATCTATGGGGATGTTCTTAGAGGTAATTTGCCGATTTCTACTTATACGAGAATCAAAGCGAAAGTTCGTGTGCTGTTCTTTCATATTCATGTTACGTCTACTTCCACCTGTGATGTGAATATTGATGTGCAGTCTAGACGTGTTGCGAATCAGACGTGCCAGTATAAGAACAAAATTTAG | 660 | 50.3 | MDIEKKDEQPLRSTTTASAPAAVSGGSSGNRHRRLRIIICSSLIGITLTIALIILILALTVFKPKKPVLTVDSVSIQDLDVSVNPIPIQVSLNLSLALGITIENRNKVSISYRSSSSALRYRGKEIGSVPIPAGELGADDLTELNLTLTVFADRLVSDSEIYGDVLRGNLPISTYTRIKAKVRVLFFHIHVTSTSTCDVNIDVQSRRVANQTCQYKNKI | 219 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fso1g02038 | 219 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
| Fso1g02038 | 219 | Gene3D | - | 55 | 202 | - | - | |
| Fso1g02038 | 219 | Pfam | Late embryogenesis abundant protein | 100 | 195 | IPR004864 | - | |
| Fso1g02038 | 219 | PANTHER | LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY | 30 | 213 | - | - | |
| Fso1g02038 | 219 | SUPERFAMILY | LEA14-like | 52 | 158 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fso1g02038 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 96144 | Fso1g02038 | Fso5g02320 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 2652146 | Fso | Fso1g02038 | Fso-Chr1:59586612 | Fso5g02320 | Fso-Chr5:63497901 |