AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fso1g02053 ATGGCGCTTAAACACCACAACTTCTTAAGCTACTACCTCGTTTTCATCGCCTTCTCTATACACACATCTGCACTCGTTTCCGCCGATGCGATCCAAGGTTGCGGTGGTTTCGTCGAGGCGAGCTCATCGTTGATCAACGCTAGGAAGCCAACGGATGCGAAATTGGACTATTCACATATCACGGTTGAGCTGCGTACTTTGGATGGCTTGGTGAAGGATCGAACGCAATGTGCTCCGAATGGTTACTACTTCATCCCTGTTTATGATAAGGGTTCTTTTATTATCAAAATTAAAGGACCAGAAGGATGGTCATGGGACCCAGATCAGGTTCCTGTGCTTGTCGATCATACTGGCTGTAATGGCAACGAAGATATAAATTTTCGGTTTACAGGGTTCAGTATTAGTGGAAAAGTTGTTGGAGCAGTTGGTGGTGCAAGTTGTCCGTCTACAGATGGCGGTCCGTCAAATGTAAAGGTTGAGCTTTTGAATTCCAATGGGAATGTTGTATCTTCTGTTTTTACATCAGTTGCTGGACGTTACTCTTTCACCAATATTATTCCAGGACGATATAACTTACGGACATCCCATGATGACTTGAATATTGAAGTTAAGGGTTCAACGGAGGTTGAACTGGGATTTGGAAATAGCCAAATTGATGATATCTTTTTTGTCTCTGGTTATGATATCCGTGGGTTGGTAGTTGCACAGGGAAATCCTATTTTGGGGGTTCACTTTTATCTGTACTCTGATGATGTTAAAAAAGTGCACTGCCCACAGGGTTCTGGTAACCCATCTGGAGATAGAACTGCTCTCTGTCATGCAATATCTGATGTTGATGGAAAATTCAATTTTAAGTCGATTCCATGTGGTGTTTATGAGCTTATACCTTATTATAAGGGTGAGAATACAATCTTTGATGTGTCCCCTCCCTCTGTCACTGTGACTGTTCAGCATGATCATGCAACAGTATCTGAAAAGTTTCAGGTTACTGGGTTTTCTGTTGGGGGTCGTGTTGTTGATTCTGATGGCAAGGGAGTGGATGGTGTGAAAATTGTGGTGGATGGTATTGAGAGGTCCGTCACTGATAAAGAAGGATATTATAAGCTTGACCAGGTTACATCTAAACAGTATCTGATTGAAGCAGAAAAGGAGCACTACAAGTTTGACAAATTGATTGACTTCATGGTTTTACCAAATATGGCATCAGTTGCTGATATCAAAGCAGTGTCATATGATGTTTGTGGCTCAGTGCAGATGGTTGATTCTGGTTCCAAAGCAAAAGTGGCTCTGACTCATGGACCGCATAATGTTAAACCACAAATGAAACAAACTGATGATAAAGGCTATTTCTGCTTTGAGGTTCCACCTGGTGATTACCGGTTGTCAGCTATTGCAGCCACACCTGAAAATACTCCGCATCTTTTATTTTCACCACAACATATGGATGTCAATGTCAATGGTCCATTGCTGTCACTGAGTTTCTATCAGGCACAAGTTAATGTAGGTGGTTCGGTAACTTGCAAAGAAAAATGTGATTCATCTGTTTCTGTTGATCTTGTGAGATTGGATGCTAAAAGCAATGAAGAAAGGCAGACAGTTGGTTTGACTGACCAAAGTAGTGAATTTTTATTTCAAAATGTCCTACCTGGAAAATATAAGCTTGAGGTCAAACACCTTTCTAAAGGAGCTATATCTGGAGAAGATAATTGGTGTTGGGAACAAAACTCCATATTTCTTAATGTTGGAACAGAAGATGTTAAAGGGATTAACTTTGTTCAGAAAGGTTATTGGGTTAACTTAGTTTCCACTCATGATGTAGATGCACATCTGCATCAATCATATGGTTCCCGTGTGACTCTGAAAATCAAGAAAGGTCCTCAGCAATTATGCATTGAATCTCCTGGAGTGCATGAACTCCACTTTGTGAACTCTTGTATACATTTTGGGAGTTTGCCTGTGAAAATTGACACTGCCAACACATCACCTACTAATCTAAAAGGAGAGAAGTATCTACTCCAAGGAGAAATTAAGGTTGAATTGACATCACAAAATGACGTTGACCAGTTACCTAAAAATCTAGTGGTTGACATTTTGAATGATGAAGGAAAAGTTATTGATGGCAGTACTGCGAAATTTGTTGTCAGTGAGAATGAACAATCAAATACAGCTCTTTATGAATATAAAGTGTGGGCAAATCCTGGAGAAAAACTTACATTTGCACCTCGGGATATGCGGAGCGGAAATGAAAAAAAGATCTTATTTTATCCTAGACAACATCAGGTTAAAGTGGCACAAGATGGCTGTCAAGCTGTTCCTCCTTTTGCTGGACGACTTGGGTTGTACATTGAAGGATCAGTTTCTCCCCCGCTTCCAGATGTTATTATTAGAATCATAGCTTCTGGAGATAGTCAAAATGCTCAACTAAAACAAAATGAATTGGCCTATGAAACAACTACAAGCACAGATGGCTCGTTTATTGGTGGACCGCTATATGATGACATCACTTACCATACCCAAGCTTTAAAGCCTGGTTATCATGTAAAGGAAATTGGACCCAATTCCTTTTCGTGCCAGAAGCTTGGTCAAATATCTGTTCGTATACATTCTAAAGAAGATGCCAATGAATTATTTCCCTCGGTGTTGTTATCATTAAGCGGGGAAGATGGTTATAGAAATAACTCAATATCTGCTGCTGGTGGAACTTTTGTATTTGATAATCTATTTCCAGGAAGTTTTTATCTCCGTCCTCTGCTAAAGGAGTATGCTTTCTCACCATCAGCACAAGCAGTTGAACTTGGGTCCGGGGAGTCCACGGAAGTTGTCTTCCAAGCTACACGCGTTGCTTACAGTGCCATGGGTGTGGTTACTCTGTTATCTGGTCTACCAAAAGAAGGTGTTTCAGTCGAGGCCCGCTCGGACACAAAAGGTTATTATGAGGAAACTGTCACAGATTCATTGGGAAATTATCGCCTAAGGGGACTTCACCCTGATACCACTTACACAATTAAAATTGGAAAAATAAATGGATTTGGCACCTCTAACATTGAACGGGCTTCCCCAGAATCTGTTGAAGTCAAGGTTGGATATGAAGATATCAAAGGACTAGACTTTTTGGTTTTTGAGCAGCCGGAAATAACTCTATTAACTGGCATTGTTCGCGAAATCAGTACTAAAGATAGGTTTACTGCAAGCAGTAATAAAGAGGTGTATGAACACCTACAGTTGGAAATCAGATCGGCTAGTGATCCATCCAATATCGAATCATTGTCACCTGTGTCGATTTCAAACTTCTTCCAGGTAAAGGGTTTGCCTAGGGGCAAACATCTTCTGCAGCTTCGGTCTACTCTAACACCACGTACCCTCAGATTTGAATCTGAAGTGATTGAGGTTGATTTGGAGAAAAATACCCAAGTTGATGCGGGTTTCTTGAGATTCAAAGTTGAAGATGATCACCATAAACAGCAGGAATTGACTCCGGCACCTGTTTATCCACTCATTATTGGAGTATTAGTGATTGCATTATTAATCAGCATGCCAAGATTAAAAGACGTATACCAAAGCAATGTAGGAGTATTGGTACCGGGACCCAGTTCATCAACGAAGAAAGTCGTGAGGAAGAAGACTTACTGA 3630 40.72 MALKHHNFLSYYLVFIAFSIHTSALVSADAIQGCGGFVEASSSLINARKPTDAKLDYSHITVELRTLDGLVKDRTQCAPNGYYFIPVYDKGSFIIKIKGPEGWSWDPDQVPVLVDHTGCNGNEDINFRFTGFSISGKVVGAVGGASCPSTDGGPSNVKVELLNSNGNVVSSVFTSVAGRYSFTNIIPGRYNLRTSHDDLNIEVKGSTEVELGFGNSQIDDIFFVSGYDIRGLVVAQGNPILGVHFYLYSDDVKKVHCPQGSGNPSGDRTALCHAISDVDGKFNFKSIPCGVYELIPYYKGENTIFDVSPPSVTVTVQHDHATVSEKFQVTGFSVGGRVVDSDGKGVDGVKIVVDGIERSVTDKEGYYKLDQVTSKQYLIEAEKEHYKFDKLIDFMVLPNMASVADIKAVSYDVCGSVQMVDSGSKAKVALTHGPHNVKPQMKQTDDKGYFCFEVPPGDYRLSAIAATPENTPHLLFSPQHMDVNVNGPLLSLSFYQAQVNVGGSVTCKEKCDSSVSVDLVRLDAKSNEERQTVGLTDQSSEFLFQNVLPGKYKLEVKHLSKGAISGEDNWCWEQNSIFLNVGTEDVKGINFVQKGYWVNLVSTHDVDAHLHQSYGSRVTLKIKKGPQQLCIESPGVHELHFVNSCIHFGSLPVKIDTANTSPTNLKGEKYLLQGEIKVELTSQNDVDQLPKNLVVDILNDEGKVIDGSTAKFVVSENEQSNTALYEYKVWANPGEKLTFAPRDMRSGNEKKILFYPRQHQVKVAQDGCQAVPPFAGRLGLYIEGSVSPPLPDVIIRIIASGDSQNAQLKQNELAYETTTSTDGSFIGGPLYDDITYHTQALKPGYHVKEIGPNSFSCQKLGQISVRIHSKEDANELFPSVLLSLSGEDGYRNNSISAAGGTFVFDNLFPGSFYLRPLLKEYAFSPSAQAVELGSGESTEVVFQATRVAYSAMGVVTLLSGLPKEGVSVEARSDTKGYYEETVTDSLGNYRLRGLHPDTTYTIKIGKINGFGTSNIERASPESVEVKVGYEDIKGLDFLVFEQPEITLLTGIVREISTKDRFTASSNKEVYEHLQLEIRSASDPSNIESLSPVSISNFFQVKGLPRGKHLLQLRSTLTPRTLRFESEVIEVDLEKNTQVDAGFLRFKVEDDHHKQQELTPAPVYPLIIGVLVIALLISMPRLKDVYQSNVGVLVPGPSSSTKKVVRKKTY 1209
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fso1g02053 1209 SUPERFAMILY Carboxypeptidase regulatory domain-like 333 426 IPR008969 -
Fso1g02053 1209 Gene3D Immunoglobulins 146 222 IPR013783 -
Fso1g02053 1209 SUPERFAMILY Cna protein B-type domain 150 199 - -
Fso1g02053 1209 Pfam BOS complex subunit NOMO1-like, first beta sandwich domain 51 127 IPR055075 -
Fso1g02053 1209 Gene3D - 334 411 - -
Fso1g02053 1209 SUPERFAMILY Cna protein B-type domain 874 934 - -
Fso1g02053 1209 Pfam BOS complex subunit NOMO1-like, beta sandwich domain 779 851 IPR055073 -
Fso1g02053 1209 SUPERFAMILY Cna protein B-type domain 953 1021 - -
Fso1g02053 1209 PANTHER CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING 30 1187 IPR051417 GO:0005789(PANTHER)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fso1g02053 K26500 BOS complex subunit NOMO