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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fso1g02097 ATGTCTCCTCTGCAAACCCTAATCTCCATCTTCCTCATATCCTCATCCCTTCCACTCATCTCCCCCACCACCACCGCCGTCGCCGTCTCCGCCGCTCCGACGGTGTACGAAGCACTCGAATCGTACGATTTCCCGGCGGGTCTGCTTCCGTTGGGGGTGAGGGGCTACACTCTCGACGAACAAACGGGTCAATTCGAGGTGGACATCGGTCAAACGTGCACGTACACCGTTCAAGGGTACAATCTGAAGTACCAATCGACGATCAGCGGTGTGATTAGTAGAGATAAGTTGACCAATTTGAAGGGGGTGAGCGTGAAGGTCCTGTTCTTCTGGTTGGATATTGTGGAGGTGAGTCGCGATGGTGATCAGTTGTATCTGTCGGTGGGGGTGCTGTCGGCGGGGTTTGATATCAGTGGGTTCGTTGAGTCGCCGCAGTGTGGGTGTGGGTTCGATTGCAATGGTGTAGGTGGTTCGGTGACGGGGAGTGAGGATGATGATAAGATGGAGTTGTGGTCTTCGTTGTGA 525 54.29 MSPLQTLISIFLISSSLPLISPTTTAVAVSAAPTVYEALESYDFPAGLLPLGVRGYTLDEQTGQFEVDIGQTCTYTVQGYNLKYQSTISGVISRDKLTNLKGVSVKVLFFWLDIVEVSRDGDQLYLSVGVLSAGFDISGFVESPQCGCGFDCNGVGGSVTGSEDDDKMELWSSL 174
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fso1g02097 174 Gene3D - 22 143 IPR036758 -
Fso1g02097 174 PANTHER T31J12.3 PROTEIN-RELATED 27 147 IPR007493 -
Fso1g02097 174 SUPERFAMILY At5g01610-like 7 152 IPR036758 -
Fso1g02097 174 Pfam Protein of unknown function, DUF538 35 140 IPR007493 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fso1g02097 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
96150 Fso1g02097 Fso2g02718
96151 Fso1g02097 Fso5g02261
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2606450 Fso Fso1g02097 Fso-Chr1:60610744 Fso3g02626 Fso-Chr3:57133772
2648552 Fso Fso1g02097 Fso-Chr1:60610744 Fso2g02718 Fso-Chr2:64072733
2651956 Fso Fso1g02097 Fso-Chr1:60610744 Fso5g02261 Fso-Chr5:62790670