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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fso1g02107 ATGGAAACAGAACAGAAGCCTGTGATGATCGTCGGAATTGACGACAGTGAGCACAGCTTCTACGCACTTGAATGGACGTTGGATCACTTCATAGCACCATCGGCTCCGAATCATCCGTTCAAACTGATCATCGTTCACTCTAAACCGTCTCCGACTGCTGCAATCGGATTCGCCGGACCTGGTGCGGCGGATGTGTATCCGTTTGTGGATTCGGATTTGAAGAAGATCGCTGCTCGTGTGGCGGAAAGAGCGAAGGAACTTTGCCATTCGAAATCGGTGGATGATGTGATAGTTGAAGTTGTGGAAGGCGATGCAAGGAACGTTCTATGTGAAGCTGTAGAGAGGCACCATGCTACGATGCTGGTAGTTGGTAGCCATGGCTATGGAGCAGTTAAAAGGGCGGTTTTGGGGAGTGTAAGTGACTATGTTACTCATCATGCCCACTGCACTGTGATGATTGTGAAGAAGCCGAAGACCAAACACTCTGGTTAG 492 49.39 METEQKPVMIVGIDDSEHSFYALEWTLDHFIAPSAPNHPFKLIIVHSKPSPTAAIGFAGPGAADVYPFVDSDLKKIAARVAERAKELCHSKSVDDVIVEVVEGDARNVLCEAVERHHATMLVVGSHGYGAVKRAVLGSVSDYVTHHAHCTVMIVKKPKTKHSG 163
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fso1g02107 163 Gene3D HUPs 3 162 IPR014729 -
Fso1g02107 163 CDD USP-Like 9 154 - -
Fso1g02107 163 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 10 157 - -
Fso1g02107 163 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 2 159 - -
Fso1g02107 163 Pfam Universal stress protein family 9 155 IPR006016 -
Fso1g02107 163 PRINTS Universal stress protein signature 133 155 IPR006015 -
Fso1g02107 163 PRINTS Universal stress protein signature 6 24 IPR006015 -
Fso1g02107 163 PRINTS Universal stress protein signature 115 127 IPR006015 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fso1g02107 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
96154 Fso1g02107 Fso5g02246
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fso Fso-Chr13:50809067 Fso1g02107 Fso-Chr1:60704754 dispersed
Fso Fso-Chr1:60704754 Fso5g02246 Fso-Chr5:62673297 dispersed
Fso Fso-Chr1:60704754 Fso12g02358 Fso-Chr12:63150098 transposed