Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fso1g02107 | ATGGAAACAGAACAGAAGCCTGTGATGATCGTCGGAATTGACGACAGTGAGCACAGCTTCTACGCACTTGAATGGACGTTGGATCACTTCATAGCACCATCGGCTCCGAATCATCCGTTCAAACTGATCATCGTTCACTCTAAACCGTCTCCGACTGCTGCAATCGGATTCGCCGGACCTGGTGCGGCGGATGTGTATCCGTTTGTGGATTCGGATTTGAAGAAGATCGCTGCTCGTGTGGCGGAAAGAGCGAAGGAACTTTGCCATTCGAAATCGGTGGATGATGTGATAGTTGAAGTTGTGGAAGGCGATGCAAGGAACGTTCTATGTGAAGCTGTAGAGAGGCACCATGCTACGATGCTGGTAGTTGGTAGCCATGGCTATGGAGCAGTTAAAAGGGCGGTTTTGGGGAGTGTAAGTGACTATGTTACTCATCATGCCCACTGCACTGTGATGATTGTGAAGAAGCCGAAGACCAAACACTCTGGTTAG | 492 | 49.39 | METEQKPVMIVGIDDSEHSFYALEWTLDHFIAPSAPNHPFKLIIVHSKPSPTAAIGFAGPGAADVYPFVDSDLKKIAARVAERAKELCHSKSVDDVIVEVVEGDARNVLCEAVERHHATMLVVGSHGYGAVKRAVLGSVSDYVTHHAHCTVMIVKKPKTKHSG | 163 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fso1g02107 | 163 | Gene3D | HUPs | 3 | 162 | IPR014729 | - | |
| Fso1g02107 | 163 | CDD | USP-Like | 9 | 154 | - | - | |
| Fso1g02107 | 163 | SUPERFAMILY | Adenine nucleotide alpha hydrolases-like | 10 | 157 | - | - | |
| Fso1g02107 | 163 | PANTHER | ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN | 2 | 159 | - | - | |
| Fso1g02107 | 163 | Pfam | Universal stress protein family | 9 | 155 | IPR006016 | - | |
| Fso1g02107 | 163 | PRINTS | Universal stress protein signature | 133 | 155 | IPR006015 | - | |
| Fso1g02107 | 163 | PRINTS | Universal stress protein signature | 6 | 24 | IPR006015 | - | |
| Fso1g02107 | 163 | PRINTS | Universal stress protein signature | 115 | 127 | IPR006015 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fso1g02107 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 96154 | Fso1g02107 | Fso5g02246 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fso | Fso-Chr13:50809067 | Fso1g02107 | Fso-Chr1:60704754 | dispersed | |
| Fso | Fso-Chr1:60704754 | Fso5g02246 | Fso-Chr5:62673297 | dispersed | |
| Fso | Fso-Chr1:60704754 | Fso12g02358 | Fso-Chr12:63150098 | transposed |