AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fso1g02114 ATGGATTCCACCACACAAGAACTAAAACACCGAACCACCACAGACCAATCGCCAACCGTTCAAGACGACGACACCACCACCACAAAGACTCAAAAGCCACAATGGTCTGCGATCCCGCGCCGCGGGGTCCGGTCACTGGCGGTTGGGATCGCGGTCCCGCTGGCTCTAACCCTAGCCAACATATCCATGTTCGGATGGAACCGAACCTACCGGACCATCCAAAAGCCCTTTTGGGTGCCACCCTTATGGGCGTTACATTTAACGTGTTTGTCTTCGGCTTTTGTCATGGGTTTATCGGCCTGGCTCGTGTGGGCCGAGGGCGGGTTTCATCGAAAACCGGGTGCGGTCTGGTTGTATTTGGGTCAGTTGGGTTTGAGTCTGGCTTGGGACCCGATATTCTTCAAGATGGGTGCGGCTAGGGCGGGTTTGTTGGTGTCGTTGGCTCAGTTGACGACTACGTTGTCGTGTTCGCGGATGTTCGGGCGGGTTAACCGGACCGCGGGTGACTTGGTGAAGCTTTGTTTGGTCTGGTCCGGGTTTTTGACGCTTGTGAACTTGTATTTTGTGGTTTGA 573 54.8 MDSTTQELKHRTTTDQSPTVQDDDTTTTKTQKPQWSAIPRRGVRSLAVGIAVPLALTLANISMFGWNRTYRTIQKPFWVPPLWALHLTCLSSAFVMGLSAWLVWAEGGFHRKPGAVWLYLGQLGLSLAWDPIFFKMGAARAGLLVSLAQLTTTLSCSRMFGRVNRTAGDLVKLCLVWSGFLTLVNLYFVV 190
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fso1g02114 190 Gene3D TspO-MBR protein 42 190 IPR038330 -
Fso1g02114 190 MobiDBLite consensus disorder prediction 10 34 - -
Fso1g02114 190 PANTHER PERIPHERAL-TYPE BENZODIAZEPINE RECEPTOR 32 188 IPR004307 GO:0016020(InterPro)
Fso1g02114 190 MobiDBLite consensus disorder prediction 1 34 - -
Fso1g02114 190 Pfam TspO-MBR family 52 188 IPR004307 GO:0016020(InterPro)
Fso1g02114 190 CDD TSPO-MBR 46 189 IPR004307 GO:0016020(InterPro)
Fso1g02114 190 FunFam translocator protein 2 42 190 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fso1g02114 K05770 translocator protein
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fso Fso-Chr1:60840612 Fso5g02254 Fso-Chr5:62750959 wgd