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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fso1g02122 ATGGCACATTCAAAAACTCATCATCACCATCATCATCATCATCATCATCATCATATTCATCATCTTCTTCTTCTTCTGGTGATGTCCGCCGTGATTCTGCCTCGGGCGACCGCCGGCGTCGCCGATTTTAACTTTCCGGCGACGCAAGGCGGAGGGTGCAGCGGCTCGATCGCCGAGTGTATGATCGGAGGAGAGGTGGAGATGGAGTCGGAGAGCACACGGCGTATATTAGCGACGACGAGGTACATCAGCTATGGAGCGCTGCAGGGGAACAATGTGCCGTGCTCGCAGAGAGGTGCGTCGTATTATAACTGTCGATCTGGTGGTCAGGCGAATCCGTATCAACGTGGTTGCAGTACGATTACTCGTTGCCGACGGTGA 381 53.81 MAHSKTHHHHHHHHHHHHIHHLLLLLVMSAVILPRATAGVADFNFPATQGGGCSGSIAECMIGGEVEMESESTRRILATTRYISYGALQGNNVPCSQRGASYYNCRSGGQANPYQRGCSTITRCRR 126
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fso1g02122 126 PANTHER RAPID ALKALINIZATION FACTOR-LIKE 23 126 - GO:0009506(PANTHER)|GO:0019722(PANTHER)
Fso1g02122 126 Pfam Rapid ALkalinization Factor (RALF) 65 126 IPR008801 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fso1g02122 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fso Fso-Chr11:6443032 Fso1g02122 Fso-Chr1:61032566 dispersed
Fso Fso-Chr1:61032566 Fso4g00597 Fso-Chr4:8084561 dispersed
Fso Fso-Chr1:61032566 Fso2g02706 Fso-Chr2:63929174 wgd