AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fso1g02160 ATGGAGGTGAAGAGCAAGTTATCAGCACAGTGGTGGTGGTTTGACAGTCAGAGCAACAGCATCCCGAGGAAATCTCCATGGTTACACTCTACTCTTGCAGAACTGGATGAGAAGACAGAGGCCATGCTTAAACTAATTGAGGAAGACGCAGATTCATTTGCAAAGCGTGCAGAAATGTATTACAAGAAACGACCTGAGCTTATCACCATAGTTGAGGATCTCTACAGGGCTCATCGCTCATTAGCAGAAAAATATGATCAAGTCAAATTTGATGGCGGTAACCGCCACTTGACTCCATGGTCGTCTTGCCCTTTACCCTTGTCCAAATACCGAACTTCTCAACTAGCAAAAGAATCAGAGAAATCATATGACAGTTACTCCGAGTCCTTTGACTTTGACCATGACTATTATGATTCTGATGACTCTGTGGTGGTTGATGATCTTGAACAACAACAACAAGAACAACAAGGGGAAGAAGAAGATGGAAGTACCCAATTCGACGAAGAAACCATAAAAGTTAAGAATTCAGATGAAGAAATAGCGCGGTTGAGGGAAGAAATCGATGAACTGAGACGTGAAAACAAGATTCAGAAAGATCAATTGATTCAGAAAGATGAAGAGAAGAAAGAGGCAATAAGACAACTCAGTTTTTGTGTGGATTATTTCAAGCAAGAAAATTTAGATCTGAAAACAAGAGTTGCTAAAGATTCTTTCAATAAGCAAAACAGCAACATCAGCAGCAGAAGCCCATTTGAGTTCACCAAACTAAAAGGGGTATTTTGGGGAATGTTTTCTAATGGTGAAGCTGCTGCTGTCCCTTTATAA 825 40.48 MEVKSKLSAQWWWFDSQSNSIPRKSPWLHSTLAELDEKTEAMLKLIEEDADSFAKRAEMYYKKRPELITIVEDLYRAHRSLAEKYDQVKFDGGNRHLTPWSSCPLPLSKYRTSQLAKESEKSYDSYSESFDFDHDYYDSDDSVVVDDLEQQQQEQQGEEEDGSTQFDEETIKVKNSDEEIARLREEIDELRRENKIQKDQLIQKDEEKKEAIRQLSFCVDYFKQENLDLKTRVAKDSFNKQNSNISSRSPFEFTKLKGVFWGMFSNGEAAAVPL 274
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fso1g02160 274 MobiDBLite consensus disorder prediction 148 165 - -
Fso1g02160 274 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 92 IPR011684 GO:0003779(InterPro)
Fso1g02160 274 PANTHER PROTEIN NETWORKED 4A 9 183 IPR051861 GO:0005774(PANTHER)
Fso1g02160 274 MobiDBLite consensus disorder prediction 148 170 - -
Fso1g02160 274 Pfam KIP1-like protein 11 86 IPR011684 GO:0003779(InterPro)
Fso1g02160 274 Coils Coil 166 207 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fso1g02160 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
96161 Fso1g02160 Fso5g02224
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fso Fso-Chr1:61937977 Fso1g02251 Fso-Chr1:63690415 dispersed
Fso Fso-Chr1:61937977 Fso5g02224 Fso-Chr5:62404764 wgd