AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fso1g02196 ATGAGAATGAAGGTTTCGTTCGCCTTCACGAGGTCTTCTGCTGTTCGTGCGTCGGTGTTTCTTCTGCTTCTCGCTACCTTCGCTTTTGCGTGCTTCTCTCTCCCGATTGAAAAGATTTTGAAGAACTTTTTGCTCTGGATTAAGGAAGAGTTGGGTCCTTGGGGTCCACTTGTTCTTGCCATTGCTTATATTCCTCTTACTGTGTTTGCGGTTCCAGCCTCTGTGCTTACGCTTGGAGGGGGGTATCTCTTTGGACTGCCAGTAGGATTTGTTGCTGATTCAATTGGTGCGACCCTTGGTGCAACAGCTGCTTTCCTTGTTGGCAAGACGATAGGACGGTCTTATGTCATTTCTAAGTTGAAGAAATATCCCAAGTTCCAGGCTATAGCTATTGCAATACAAAGATCCGGCTTCAAGATTGTTTTGCTGCTTCGTTTTGTCCCATTGCTTCCATTTAACGTCTTGAATTACCTGCTGTCTGTTACTCCTGTTCGCTTATGGGAGTATATGTTGGCCACTTGGCTGGGGATGATGCCAATCACATTCATGTTCGTGTATATTGGAACAACTCTCAAGGACATTTCTGATGTTACACATGGATGGCATGAGATATCAAAAACTCGTTGGATGTTTATGGCTTTTGGGCTCTCAATATCAGTGATCATGATCGTTTACATCATTAAAGTCGCAAAAGCTTCTCTGGAAAAAGCACTAGCTGAACATGGTGAGATAGACGCCATAGATTTAGCTTCACCCGGGCTGCCTATTGTAGCCGATTCAGCCCTCGGTCTCCACAGACCGTTGATAACTACAGTGGTGTCTACTGTAGATGATCTTGTCTGA 843 44.84 MRMKVSFAFTRSSAVRASVFLLLLATFAFACFSLPIEKILKNFLLWIKEELGPWGPLVLAIAYIPLTVFAVPASVLTLGGGYLFGLPVGFVADSIGATLGATAAFLVGKTIGRSYVISKLKKYPKFQAIAIAIQRSGFKIVLLLRFVPLLPFNVLNYLLSVTPVRLWEYMLATWLGMMPITFMFVYIGTTLKDISDVTHGWHEISKTRWMFMAFGLSISVIMIVYIIKVAKASLEKALAEHGEIDAIDLASPGLPIVADSALGLHRPLITTVVSTVDDLV 280
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fso1g02196 280 Pfam VTT domain 71 189 IPR032816 -
Fso1g02196 280 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Fso1g02196 280 PANTHER UNCHARACTERIZED 14 266 IPR015414 GO:0016020(InterPro)|GO:0016020(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fso1g02196 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fso Fso-Chr16:52823575 Fso1g02196 Fso-Chr1:62662469 dispersed