Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fso1g02214 | ATGCTCAACATCTTCAACAAAAACCTCCGGCGACTCTGCTCAAAGCTCCGGTGGCCGGTGCGCCGCCGTGCAAAGCCCAAAGTCATCATCAAAAGATTCGGAAGATCAAATTCAAGAAATCAAGATTCTGTAAACACAAATGGGTCAGCCACAATTCACCCAAATAACCATTTGGGTGTTCAAAAATCAGAAAACCCAATTCGAATTGCAACATTTAATGCTGCTTTATTCTCCATGGCGCCAGCAGTTCCAGAGTTGACCAAAAAAGCATCAAGCTTTGACCATGGCGATGATGATGATGATCACACAAAGGTAGATTCCAATTCCTCTGTTTCTTACAGTACTTCAAGGTCAAAATCAATGGTTGATCGACCCAAAAGTATATTGAAACAATCACCATTACATTCAAGCTCAATGAGGAGTTCAGAAGCTTTATCAAAACAGCAGAAATTCGCAAAGTCAAAGCTAAGAGTATCGATAAACTTACCTGATAATGAGATCTCATTGAAAAGAAGTGGGCAATTGAGCTTTGTTACCGACGAAAAAGAACCCGACCCGGGTTCAAGAACAAGTAGTTCTAAGGGAATTAGCAAGATTTTGAAAGGGAAAGGTGTTTTGAGATCACAAAACAGTGTTTCTTTAAGGGAAGTTGAAAGTCAAAGGGGGACTTATAGGTCAACGAAGACTGTTCTTGAGGTTTTGAAAGAATTGAATGCTGATATATTGGCTTTACAAGATGTGAAAGCTGAAGAAGAGAAAGATATGAAACCATTGTCTGATCTTGCTGCTGCTTTGGGTATGAATTATGTGTTTGCTGAGAGTTGGGCACCCGAATATGGTAACGCGGTGTTGTCGAAGTGGCCGATCAAACGATCGAAGGTTCAGAAAATTTTTGATGATTCTGACTTCAGGAATGTTTTAAAGGCGACCATTGATGTTCCACAAACCGGAGAAGTTGATTTTCATTGTACCCTTCTTGATCATCTTGATGAAAATTGGCGAATGAAGCAAATAAAAGCAATCATTGAATCTAATGAGAGACCACACATCTTAGCTGGAGGTATCAACTCTCTTGATGAAACAGATTACTCGCCCGAAAGATGGACAGACATTGTTAAGTACTATGAGGAAATGGGAAAACCGACACCAAAAGTTGAAGTGATGAAGTACTTAAAGAGCAAACAGTACACTGATGCTAAGGATTTTGCAGGCGAATGTGAATCTGTAGTCATTATCGCTAAAGGCCAAAATGTGCAGGGTACATGCAAATATGGTACTAGGGTAGATTATATATTGGTGTCGCCCGATTCACCTTACAAGTTTGTTCCTGGTTCATATATGGTTTTATCATCAAAAGGTCATGGATCGAGACTGTCCCCTCCATGA | 1386 | 40.19 | MLNIFNKNLRRLCSKLRWPVRRRAKPKVIIKRFGRSNSRNQDSVNTNGSATIHPNNHLGVQKSENPIRIATFNAALFSMAPAVPELTKKASSFDHGDDDDDHTKVDSNSSVSYSTSRSKSMVDRPKSILKQSPLHSSSMRSSEALSKQQKFAKSKLRVSINLPDNEISLKRSGQLSFVTDEKEPDPGSRTSSSKGISKILKGKGVLRSQNSVSLREVESQRGTYRSTKTVLEVLKELNADILALQDVKAEEEKDMKPLSDLAAALGMNYVFAESWAPEYGNAVLSKWPIKRSKVQKIFDDSDFRNVLKATIDVPQTGEVDFHCTLLDHLDENWRMKQIKAIIESNERPHILAGGINSLDETDYSPERWTDIVKYYEEMGKPTPKVEVMKYLKSKQYTDAKDFAGECESVVIIAKGQNVQGTCKYGTRVDYILVSPDSPYKFVPGSYMVLSSKGHGSRLSPP | 461 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fso1g02214 | 461 | Pfam | Endonuclease-Exonuclease-phosphatase family | 222 | 436 | IPR005135 | GO:0003824(InterPro) | |
| Fso1g02214 | 461 | PANTHER | CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR | 14 | 453 | IPR051916 | GO:0005783(PANTHER)|GO:0006506(PANTHER) | |
| Fso1g02214 | 461 | MobiDBLite | consensus disorder prediction | 90 | 106 | - | - | |
| Fso1g02214 | 461 | Gene3D | Endonuclease-exonuclease-phosphatase | 210 | 455 | IPR036691 | - | |
| Fso1g02214 | 461 | MobiDBLite | consensus disorder prediction | 90 | 148 | - | - | |
| Fso1g02214 | 461 | Coils | Coil | 234 | 254 | - | - | |
| Fso1g02214 | 461 | MobiDBLite | consensus disorder prediction | 107 | 122 | - | - | |
| Fso1g02214 | 461 | FunFam | Endonuclease-exonuclease-phosphatase family protein | 215 | 457 | - | - | |
| Fso1g02214 | 461 | MobiDBLite | consensus disorder prediction | 36 | 59 | - | - | |
| Fso1g02214 | 461 | MobiDBLite | consensus disorder prediction | 173 | 196 | - | - | |
| Fso1g02214 | 461 | MobiDBLite | consensus disorder prediction | 130 | 148 | - | - | |
| Fso1g02214 | 461 | SUPERFAMILY | DNase I-like | 228 | 451 | IPR036691 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fso1g02214 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 398654 | Fso12g01934 | Fso1g02214 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fso | Fso-Chr11:6604627 | Fso1g02214 | Fso-Chr1:62969910 | dispersed | |
| Fso | Fso-Chr1:62969910 | Fso12g01934 | Fso-Chr12:57862046 | wgd |