Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fso1g02223 | ATGGAGTCACCTCAGGCACACATGCGTTCAATCAAGCTATGGCCACCGAACCACACCACCCGCGTACTTCTCGTTAATCGAATCATAAAATGCTTCACAACCCCATCAATTTTGACAAGAAAGTACGGTCTTTTAAGCAAAGAAGAAGCAGAGGAAGAAGCTAAACAAATCGAATCTGCAGGCTTTATTGCAGCATCCCATCAATTCGAAAAAGACCCCGAAAGCGACGGTGGATCCGCTGTTCAAGTTTACGCGAAAGAATCGAGTAAATTGATGGTGGAATTCATCAAAACAGGGCACAAACCGAAGGAATCCATGCCCGAATTGACCAAATCGGATCATGTTTTCGATATTTCAGGCGGTCGTCGGGCGTTTATCGAAGCTGAAGAGGCGAAAGAGCTGTTGAAACCGTTGAAAGAGCCCGGGAACAACTTTACAAAGATATGTTTTAGTAACCGAAGTTTTGGGTTGCCTGCGGCCCATGTCGCTGCATTGGTGTTATCGGGTGTTAAAGATCAGTTAACCGAGGTCGATTTATCGGACATTGTATCGAGGAGGCCCGAGCCCGAGGCCGTTGAGGTTATGAAGATGTTTGCATCGGCTCTTGAGGGTTGTAAGTTGAGTTATTTGAATTTGTCTAACAATGTGTTGAATGAGAAAGGGGTTAGGGCATTTGGTGATCTTTTGAGGTCTCAAGGTGGTCTTGTGGAGTTGCATTTGATGAATGCTGGGATCTCGCCCGAAGCCGCAAAGGCGGTATGTGAGTTGATTCGGGCGACGGAGAAACTTAAGGTTCTTCATTTTCATCATAATAGGATGGGAGATGAAGGTGCGCTCGCCATTTCTCAACTGGTGAAAGGATCCTCGAGTCTAGAGGATTTCAGGTGTTCCTCAACACGAGTCGGGTCTGCAGGGGGGATCGCACTAGCCGAAGCATTGAAAACTTGTACCCTTTTGAAGAAACTTGACTTACGTGACAACATGTTCGGATCAAAAGCCGGGGTTGCATTGAGTAATAACCTATCCATGCACGCTAATCTCACGGAAATTTACCTTAGTTACTTGAGTTTCGAAGACAAAGGGACTATCGCGATAGCGAATGCTCTAAAAACCTCCAAATCACCCCTCGAAGTCATTGAGATGGCGGGAAACAACATTACTTTCGAAGCGGCAAAAGGTTTAGCTGATTGCATGGCTTCAAAGAAACATTCTCTAACCAAAATAAACTTATCCGAGAATGAACTAAAGGACGAAGGTGCCATCACGATCGGGAAGGCGCTCGAAGATGATTTTGAACGATTGTGCATCGTTAATTTGAGTGCAAACATGATCAAAATAGATGGAGCTATGTCTTTGTCTAAAGCAGTTGTCGGAAATTAG | 1380 | 45.07 | MESPQAHMRSIKLWPPNHTTRVLLVNRIIKCFTTPSILTRKYGLLSKEEAEEEAKQIESAGFIAASHQFEKDPESDGGSAVQVYAKESSKLMVEFIKTGHKPKESMPELTKSDHVFDISGGRRAFIEAEEAKELLKPLKEPGNNFTKICFSNRSFGLPAAHVAALVLSGVKDQLTEVDLSDIVSRRPEPEAVEVMKMFASALEGCKLSYLNLSNNVLNEKGVRAFGDLLRSQGGLVELHLMNAGISPEAAKAVCELIRATEKLKVLHFHHNRMGDEGALAISQLVKGSSSLEDFRCSSTRVGSAGGIALAEALKTCTLLKKLDLRDNMFGSKAGVALSNNLSMHANLTEIYLSYLSFEDKGTIAIANALKTSKSPLEVIEMAGNNITFEAAKGLADCMASKKHSLTKINLSENELKDEGAITIGKALEDDFERLCIVNLSANMIKIDGAMSLSKAVVGN | 459 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fso1g02223 | 459 | Gene3D | WPP domain | 10 | 106 | IPR038214 | - | |
| Fso1g02223 | 459 | Pfam | WPP domain | 10 | 104 | IPR025265 | - | |
| Fso1g02223 | 459 | SUPERFAMILY | RNI-like | 125 | 457 | - | - | |
| Fso1g02223 | 459 | SMART | LRR-RI-2 | 260 | 287 | - | - | |
| Fso1g02223 | 459 | SMART | LRR-RI-2 | 344 | 371 | - | - | |
| Fso1g02223 | 459 | SMART | LRR-RI-2 | 316 | 343 | - | - | |
| Fso1g02223 | 459 | SMART | LRR-RI-2 | 373 | 400 | - | - | |
| Fso1g02223 | 459 | SMART | LRR-RI-2 | 288 | 315 | - | - | |
| Fso1g02223 | 459 | SMART | LRR-RI-2 | 204 | 231 | - | - | |
| Fso1g02223 | 459 | SMART | LRR-RI-2 | 232 | 259 | - | - | |
| Fso1g02223 | 459 | SMART | LRR-RI-2 | 402 | 429 | - | - | |
| Fso1g02223 | 459 | Gene3D | Ribonuclease Inhibitor | 122 | 418 | IPR032675 | - | |
| Fso1g02223 | 459 | PANTHER | RAN GTPASE-ACTIVATING PROTEIN 1 | 2 | 458 | IPR045203 | GO:0005096(InterPro) | |
| Fso1g02223 | 459 | Pfam | Leucine Rich repeat | 205 | 225 | IPR001611 | GO:0005515(InterPro) | |
| Fso1g02223 | 459 | Pfam | Leucine Rich repeat | 402 | 423 | IPR001611 | GO:0005515(InterPro) | |
| Fso1g02223 | 459 | Pfam | Leucine Rich repeat | 316 | 338 | IPR001611 | GO:0005515(InterPro) | |
| Fso1g02223 | 459 | Pfam | Leucine Rich repeat | 262 | 282 | IPR001611 | GO:0005515(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fso1g02223 | K14319 | Ran GTPase-activating protein 1 |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 96167 | Fso1g02223 | Fso2g02654 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fso | Fso-Chr1:63233951 | Fso2g02654 | Fso-Chr2:63463375 | dispersed |