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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fso1g02224 ATGGATGCTTCAAGAACATCGGCTATTTGCTTCGGTATGGAATCTATAGGGCTTGACAATGATATCGCAGGCTCAAAAACATATTGTAATCTAGGACTCAAACAAACATATAAGCACCATCATGGAAACCCGAAAGTTTTATCACTTCTTTCTTCACTGCTTGAAAGATCTGTCCAAATGAATGAGACTTTACTCGAGAAAACACAAACTAAAGATGTTATTACGGTTTTTCATGGTTCAAGAGCACCAACACTTGGCATCAGAGAGTATGTTGATAGAATATTCAAGTACTCGCATTGCAGTCCCTCGTGTTTTGTTGTTGCACAGGTTTACATGGATCGGTTTATTCAGTGTGGAAATGTTAATTTGACTTCTCTTAGTGTTCATCGACTTCTCATCACTAGTATAATGCTTGCTGCCAAGTTCATTGATGACGCATTCTACAATAATGCGTATTATGCAAAAGTGGGAGGAGTAACAAACGCAGAATTAAACAGACTGGAAATGAAATTCCTTTTTGGCCTGGACTTTCGGCTCCATGTCTGCCTTCGTACGTTTGGTAGATATTGTTCCCAGTTGGAAAAACAAGATTCATGTGAGCTACAAATGAAAAGACCGCCACGCGTGATTCACGCCCCCTGTGGACCCAAAGAAACTTGGTCTGGAAGTGATGACTCAAGTCCTTATGGCACAGCTGAGATACATATCATATAG 714 40.2 MDASRTSAICFGMESIGLDNDIAGSKTYCNLGLKQTYKHHHGNPKVLSLLSSLLERSVQMNETLLEKTQTKDVITVFHGSRAPTLGIREYVDRIFKYSHCSPSCFVVAQVYMDRFIQCGNVNLTSLSVHRLLITSIMLAAKFIDDAFYNNAYYAKVGGVTNAELNRLEMKFLFGLDFRLHVCLRTFGRYCSQLEKQDSCELQMKRPPRVIHAPCGPKETWSGSDDSSPYGTAEIHII 237
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fso1g02224 237 Gene3D - 32 210 - -
Fso1g02224 237 PANTHER UNCHARACTERIZED 38 206 IPR013922 GO:0000079(InterPro)|GO:0019901(InterPro)
Fso1g02224 237 Pfam Cyclin 61 179 IPR013922 GO:0000079(InterPro)|GO:0019901(InterPro)
Fso1g02224 237 SUPERFAMILY Cyclin-like 93 180 IPR036915 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fso1g02224 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
96168 Fso1g02224 Fso5g02186
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fso Fso-Chr1:10375697 Fso1g02224 Fso-Chr1:63261687 dispersed
Fso Fso-Chr1:63261687 Fso7g00607 Fso-Chr7:7579346 dispersed
Fso Fso-Chr10:68780817 Fso1g02224 Fso-Chr1:63261687 transposed
Fso Fso-Chr1:63261687 Fso5g02186 Fso-Chr5:61940801 wgd