AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fso1g02230 ATGCCGTCATTACGCTTCCCATTCTCGTTTCCTCAGCCCCACAACCGCTTTCCCTCCGGCGCCATTTCGCCGGCGACATTCGCCTGCTCCGTCGCCGTCTCCGCAGCCGTCGGCGCCGGAGTTTCATCCTTCATCTCCATCTCCCAAAACTCCCCCAATCAATCCATTCATAACGCACTGAACTCCTTCGTTTCCAATTTCTCACGCTCGTCTCCCCTGTGGGGATCACTGTCGCTATCTGACGCCTCCGGCGATGCAGTCACTGAATCGAAGACTGGCGTTGCTTTTCCGGCGGTGTTGAAGGAGTCTCAGAGGCTGTTAGGGGTTGGATTGAGGAGGAAGGCGGTGTTTGGGTTGAAGAATATTGATGTTTACGCCTTTGGTGTGTATGCCGATGATGATGATATAAAGGGTGTTTTAAGTGAGAAATATGGAACACTCTCAACAGCTGAATTGAAGGATAAGGACATCGCTCAAGATTTGATGGAAAGTGATATAAGTGTTACAGTTAGGTTGCAAATAGTTTATGGAAAACTTAGCATTCGTTCTGTTCGAAATGCTTTTGAAGATTCTGTGGGAAACAGATTAAAGAAGTTTGGTGGATCTGAAAACAAGGAGTTACTTCAAAAGTTTACTTCCCAGTTTAGAGATGAATACAAGATTCCTCGTGGATCAATCATCGACCTCTCCAAGGAAAAAGGCTATGTGCTCCGAACTGCTATTGATGGCAAAGAGATAGGAACTGTCGAGAGCCAACTGCTGTGTCGGTCAATATTGGATCTTTATATTGGTGACGACCCGTTTGATTCAAAAGCAAAAGAAGACATTGACCTTAAACTTGTTTCCGCCATTACAAAGTAA 861 45.99 MPSLRFPFSFPQPHNRFPSGAISPATFACSVAVSAAVGAGVSSFISISQNSPNQSIHNALNSFVSNFSRSSPLWGSLSLSDASGDAVTESKTGVAFPAVLKESQRLLGVGLRRKAVFGLKNIDVYAFGVYADDDDIKGVLSEKYGTLSTAELKDKDIAQDLMESDISVTVRLQIVYGKLSIRSVRNAFEDSVGNRLKKFGGSENKELLQKFTSQFRDEYKIPRGSIIDLSKEKGYVLRTAIDGKEIGTVESQLLCRSILDLYIGDDPFDSKAKEDIDLKLVSAITK 286
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fso1g02230 286 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Fso1g02230 286 PANTHER FATTY-ACID-BINDING PROTEIN 1 1 284 IPR044228 GO:0005504(PANTHER)|GO:0006631(PANTHER)|GO:0009570(PANTHER)
Fso1g02230 286 Gene3D - 89 262 IPR016088 -
Fso1g02230 286 Gene3D - 135 276 IPR016089 -
Fso1g02230 286 SUPERFAMILY Chalcone isomerase 88 284 IPR036298 GO:0016872(InterPro)
Fso1g02230 286 Pfam Chalcone isomerase like 105 276 IPR016087 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fso1g02230 - -