Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fso1g02294 | ATGGCGACAATGCACCAAATTTCTCTCACAAACAACCTTCAATGGATCCCCAACAAACCTCAACTCAACACCCTCAAACACACACCTCAAAAGAATCATATCTTCATACGCTCTACACCATCATCATCTTCTTCATCGTTAAACCAAAAAATTAACAGCATATCATCCCTCAGTGCGAATGGAACCCGTGTTAACTCATCGTTCGATTACAACCACACCGGAGTACACGCCAACAACGACCACTACGAGTACGAGAAGGGTTTAATCGGAAACGGTCAACAGTACCCTAGACCTATGGAAATACCGTGGAAGAAGGAGCTGTGTAATTCCGTACAACTCATCGGAACTGTTGGTACTCCGGTGGAGTTTAAGCAGCTGAGCTCCGGAAAGGTGCTTGCTTGGTGTCGTCTTGCTGTCAAGAAATCGGCAACTGATACTACATGGATCAATTTGACGTTTTGGGATGAGATGGCACATATTGCTTCTCAGCATGTGGAAAAAGGACAACAAATATATGTATCAGGTCGTCTTGTTTCAGATACGGTTGATAGTGATGATGGAAAGCAGCAAACTTACTATAAGATAGTTGTTCAGCAGCTAAAATTCATTGAGAGAAGCCCACCTTCAGCATCATCTAATGATGGAGACTTCAACTACAATTACAATTCCAACTCGAACTCTATGGCAACAGGTAGAAAGCAAAAGAATTATGCAGCAAATGGTACAGGATCTGTAGAGGAACTATGGCAAGCTTTTTTCGCTAACCCTGTTGATTGGTGGGATAATAGGAAGAACAAGAGAAGCCCAAATTATCCCGATTTCAAGCACAAAGACACCGGTGAAGCATTATGGGTCGAAGGGAGGTTCAATCCGTCTTGGGTTAAGTCTCAGTTATCGGTATTAGATTCACGAATGGAATATTTTCATGATCAAACGCGCTCAGATTCCATGTTTGGAGACAACCTGACATCTTATTAA | 978 | 42.43 | MATMHQISLTNNLQWIPNKPQLNTLKHTPQKNHIFIRSTPSSSSSSLNQKINSISSLSANGTRVNSSFDYNHTGVHANNDHYEYEKGLIGNGQQYPRPMEIPWKKELCNSVQLIGTVGTPVEFKQLSSGKVLAWCRLAVKKSATDTTWINLTFWDEMAHIASQHVEKGQQIYVSGRLVSDTVDSDDGKQQTYYKIVVQQLKFIERSPPSASSNDGDFNYNYNSNSNSMATGRKQKNYAANGTGSVEELWQAFFANPVDWWDNRKNKRSPNYPDFKHKDTGEALWVEGRFNPSWVKSQLSVLDSRMEYFHDQTRSDSMFGDNLTSY | 325 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fso1g02294 | 325 | PANTHER | SINGLE-STRANDED DNA-BINDING PROTEIN | 49 | 310 | IPR011344 | GO:0003697(PANTHER)|GO:0003697(InterPro)|GO:0006260(InterPro)|GO:0006264(PANTHER)|GO:0009295(PANTHER)|GO:0042645(PANTHER)|GO:0051096(PANTHER) | |
| Fso1g02294 | 325 | Pfam | Single-strand binding protein family | 109 | 202 | IPR000424 | GO:0003697(InterPro) | |
| Fso1g02294 | 325 | SUPERFAMILY | Nucleic acid-binding proteins | 109 | 299 | IPR012340 | - | |
| Fso1g02294 | 325 | ProSiteProfiles | Single-strand binding (SSB) domain profile. | 107 | 204 | IPR000424 | GO:0003697(InterPro) | |
| Fso1g02294 | 325 | CDD | SSB-OBF | 111 | 203 | IPR000424 | GO:0003697(InterPro) | |
| Fso1g02294 | 325 | NCBIfam | single-stranded DNA-binding protein | 108 | 241 | IPR011344 | GO:0003697(InterPro)|GO:0006260(InterPro) | |
| Fso1g02294 | 325 | Gene3D | - | 107 | 242 | IPR012340 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fso1g02294 | K03111 | single-strand DNA-binding protein |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fso | Fso-Chr1:64669749 | Fso5g00505 | Fso-Chr5:8912479 | dispersed |