Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fso1g02308 | ATGGCAACAGGCTGCAAAGGAAAAAGTGCATGGCCAGAGCTTGTAGGGGCAACTGGAGAAGTTGCGGCCGCTACAATTGAGGAAGAGAATCCACACGTCAATGCTATCGTGGTATTGGATGGAACTCCTGTCACTGCGGACTTCCGATGTGACCGTGTGCGGGTGTGGGTGAACTCTAAGGGAGTGGTGATTCGAACGCCTATCATTACGTGA | 213 | 52.11 | MATGCKGKSAWPELVGATGEVAAATIEEENPHVNAIVVLDGTPVTADFRCDRVRVWVNSKGVVIRTPIIT | 70 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fso1g02308 | 70 | SUPERFAMILY | CI-2 family of serine protease inhibitors | 4 | 69 | IPR036354 | - | |
| Fso1g02308 | 70 | PANTHER | PROTEIN, PUTATIVE, EXPRESSED-RELATED | 4 | 69 | IPR000864 | GO:0004867(InterPro)|GO:0009611(InterPro) | |
| Fso1g02308 | 70 | Pfam | Potato inhibitor I family | 8 | 69 | IPR000864 | GO:0004867(InterPro)|GO:0009611(InterPro) | |
| Fso1g02308 | 70 | Gene3D | Trypsin Inhibitor V, subunit A | 2 | 70 | - | - | |
| Fso1g02308 | 70 | ProSitePatterns | Potato inhibitor I family signature. | 11 | 22 | IPR000864 | GO:0004867(InterPro)|GO:0009611(InterPro) | |
| Fso1g02308 | 70 | PRINTS | Potato inhibitor I signature | 10 | 23 | IPR000864 | GO:0004867(InterPro)|GO:0009611(InterPro) | |
| Fso1g02308 | 70 | PRINTS | Potato inhibitor I signature | 35 | 46 | IPR000864 | GO:0004867(InterPro)|GO:0009611(InterPro) | |
| Fso1g02308 | 70 | PRINTS | Potato inhibitor I signature | 47 | 57 | IPR000864 | GO:0004867(InterPro)|GO:0009611(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fso1g02308 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fso | Fso-Chr1:64863748 | Fso1g02313 | Fso-Chr1:64935987 | dispersed | |
| Fso | Fso-Chr1:64855826 | Fso1g02308 | Fso-Chr1:64863748 | tandem | |
| Fso | Fso-Chr1:64863748 | Fso1g02309 | Fso-Chr1:64889956 | tandem |